Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6CP48668 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
KRT6CP48668 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6CP48668 SLC25A24-204ENST00000569674 2357 ntBASIC20.65■□□□□ 0.9
KRT6CP48668 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
KRT6CP48668 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
KRT6CP48668 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KRT6CP48668 Z98882.1-201ENST00000622160 2253 ntBASIC20.64■□□□□ 0.89
KRT6CP48668 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT6CP48668 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT6CP48668 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT6CP48668 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT6CP48668 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT6CP48668 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT6CP48668 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT6CP48668 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT6CP48668 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT6CP48668 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRT6CP48668 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.63■□□□□ 0.89
KRT6CP48668 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT6CP48668 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.63■□□□□ 0.89
KRT6CP48668 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.63■□□□□ 0.89
KRT6CP48668 AC131212.1-201ENST00000613771 668 ntBASIC20.63■□□□□ 0.89
KRT6CP48668 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.63■□□□□ 0.89
KRT6CP48668 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.63■□□□□ 0.89
KRT6CP48668 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.63■□□□□ 0.89
KRT6CP48668 AP004607.7-201ENST00000527152 1677 ntBASIC20.63■□□□□ 0.89
KRT6CP48668 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.63■□□□□ 0.89
KRT6CP48668 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
KRT6CP48668 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT6CP48668 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT6CP48668 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
KRT6CP48668 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT6CP48668 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
KRT6CP48668 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT6CP48668 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT6CP48668 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
KRT6CP48668 UNC93B3-201ENST00000308076 687 ntBASIC20.62■□□□□ 0.89
KRT6CP48668 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT6CP48668 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
KRT6CP48668 BX842568.3-201ENST00000418104 571 ntBASIC20.62■□□□□ 0.89
KRT6CP48668 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT6CP48668 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KRT6CP48668 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
KRT6CP48668 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT6CP48668 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT6CP48668 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT6CP48668 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT6CP48668 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT6CP48668 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.61■□□□□ 0.89
KRT6CP48668 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT6CP48668 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT6CP48668 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT6CP48668 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT6CP48668 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.61■□□□□ 0.89
KRT6CP48668 MIR4767-201ENST00000582827 78 ntBASIC20.61■□□□□ 0.89
KRT6CP48668 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT6CP48668 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT6CP48668 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT6CP48668 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT6CP48668 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT6CP48668 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT6CP48668 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
KRT6CP48668 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT6CP48668 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
KRT6CP48668 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.6■□□□□ 0.89
KRT6CP48668 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT6CP48668 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.6■□□□□ 0.89
KRT6CP48668 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT6CP48668 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT6CP48668 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRT6CP48668 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT6CP48668 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.6■□□□□ 0.89
KRT6CP48668 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.6■□□□□ 0.89
KRT6CP48668 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
KRT6CP48668 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
KRT6CP48668 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
KRT6CP48668 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRT6CP48668 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT6CP48668 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT6CP48668 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT6CP48668 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.6■□□□□ 0.89
KRT6CP48668 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
KRT6CP48668 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRT6CP48668 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.59■□□□□ 0.89
KRT6CP48668 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT6CP48668 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT6CP48668 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT6CP48668 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT6CP48668 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
KRT6CP48668 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT6CP48668 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT6CP48668 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.59■□□□□ 0.89
KRT6CP48668 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.59■□□□□ 0.89
KRT6CP48668 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT6CP48668 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT6CP48668 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.59■□□□□ 0.89
KRT6CP48668 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT6CP48668 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
KRT6CP48668 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms