Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HTR3AP46098 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.64■□□□□ 0.73
HTR3AP46098 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HTR3AP46098 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTR3AP46098 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTR3AP46098 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTR3AP46098 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HTR3AP46098 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HTR3AP46098 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HTR3AP46098 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HTR3AP46098 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HTR3AP46098 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.63■□□□□ 0.73
HTR3AP46098 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HTR3AP46098 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HTR3AP46098 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HTR3AP46098 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HTR3AP46098 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HTR3AP46098 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HTR3AP46098 AC099791.1-201ENST00000416440 715 ntBASIC19.63■□□□□ 0.73
HTR3AP46098 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HTR3AP46098 IGHV3-19-201ENST00000521488 291 ntBASIC19.63■□□□□ 0.73
HTR3AP46098 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.63■□□□□ 0.73
HTR3AP46098 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.63■□□□□ 0.73
HTR3AP46098 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HTR3AP46098 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HTR3AP46098 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.63■□□□□ 0.73
HTR3AP46098 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HTR3AP46098 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTR3AP46098 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTR3AP46098 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTR3AP46098 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
HTR3AP46098 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTR3AP46098 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.62■□□□□ 0.73
HTR3AP46098 RASA4CP-201ENST00000424092 1398 ntBASIC19.62■□□□□ 0.73
HTR3AP46098 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTR3AP46098 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTR3AP46098 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HTR3AP46098 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.62■□□□□ 0.73
HTR3AP46098 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.62■□□□□ 0.73
HTR3AP46098 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.62■□□□□ 0.73
HTR3AP46098 AP001330.3-201ENST00000520123 633 ntBASIC19.62■□□□□ 0.73
HTR3AP46098 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.62■□□□□ 0.73
HTR3AP46098 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HTR3AP46098 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTR3AP46098 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HTR3AP46098 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HTR3AP46098 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HTR3AP46098 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.62■□□□□ 0.73
HTR3AP46098 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTR3AP46098 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTR3AP46098 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.61■□□□□ 0.73
HTR3AP46098 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HTR3AP46098 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTR3AP46098 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HTR3AP46098 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTR3AP46098 AC091305.1-201ENST00000479476 895 ntBASIC19.61■□□□□ 0.73
HTR3AP46098 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.61■□□□□ 0.73
HTR3AP46098 AL034346.1-201ENST00000568244 1277 ntBASIC19.61■□□□□ 0.73
HTR3AP46098 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HTR3AP46098 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTR3AP46098 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.61■□□□□ 0.73
HTR3AP46098 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTR3AP46098 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HTR3AP46098 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTR3AP46098 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.6■□□□□ 0.73
HTR3AP46098 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTR3AP46098 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HTR3AP46098 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HTR3AP46098 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HTR3AP46098 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HTR3AP46098 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HTR3AP46098 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTR3AP46098 PKD1P6-201ENST00000343738 4769 ntBASIC19.6■□□□□ 0.73
HTR3AP46098 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTR3AP46098 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.6■□□□□ 0.73
HTR3AP46098 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HTR3AP46098 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTR3AP46098 MIR939-201ENST00000401314 82 ntBASIC19.6■□□□□ 0.73
HTR3AP46098 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.6■□□□□ 0.73
HTR3AP46098 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.6■□□□□ 0.73
HTR3AP46098 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HTR3AP46098 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.6■□□□□ 0.73
HTR3AP46098 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HTR3AP46098 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTR3AP46098 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.6■□□□□ 0.73
HTR3AP46098 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HTR3AP46098 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTR3AP46098 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HTR3AP46098 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HTR3AP46098 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTR3AP46098 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTR3AP46098 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTR3AP46098 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HTR3AP46098 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTR3AP46098 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTR3AP46098 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HTR3AP46098 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.59■□□□□ 0.73
HTR3AP46098 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HTR3AP46098 AF213884.3-201ENST00000563833 479 ntBASIC19.59■□□□□ 0.73
HTR3AP46098 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms