Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 UNC93B3-201ENST00000308076 687 ntBASIC20.24■□□□□ 0.83
RPL3P39023 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.24■□□□□ 0.83
RPL3P39023 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.24■□□□□ 0.83
RPL3P39023 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.24■□□□□ 0.83
RPL3P39023 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPL3P39023 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.24■□□□□ 0.83
RPL3P39023 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.24■□□□□ 0.83
RPL3P39023 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPL3P39023 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPL3P39023 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RPL3P39023 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPL3P39023 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPL3P39023 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.23■□□□□ 0.83
RPL3P39023 MIR4767-201ENST00000582827 78 ntBASIC20.23■□□□□ 0.83
RPL3P39023 AC233992.3-201ENST00000607491 485 ntBASIC20.23■□□□□ 0.83
RPL3P39023 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPL3P39023 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPL3P39023 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPL3P39023 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.23■□□□□ 0.83
RPL3P39023 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RPL3P39023 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.23■□□□□ 0.83
RPL3P39023 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RPL3P39023 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPL3P39023 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
RPL3P39023 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPL3P39023 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RPL3P39023 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPL3P39023 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPL3P39023 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPL3P39023 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPL3P39023 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RPL3P39023 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPL3P39023 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.22■□□□□ 0.83
RPL3P39023 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPL3P39023 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RPL3P39023 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RPL3P39023 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.21■□□□□ 0.83
RPL3P39023 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPL3P39023 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RPL3P39023 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPL3P39023 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.21■□□□□ 0.83
RPL3P39023 AL137060.1-201ENST00000618151 2648 ntBASIC20.21■□□□□ 0.83
RPL3P39023 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPL3P39023 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.21■□□□□ 0.83
RPL3P39023 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RPL3P39023 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.21■□□□□ 0.83
RPL3P39023 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.21■□□□□ 0.83
RPL3P39023 AL136162.1-201ENST00000607711 1078 ntBASIC20.21■□□□□ 0.83
RPL3P39023 AC131212.1-201ENST00000613771 668 ntBASIC20.21■□□□□ 0.83
RPL3P39023 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RPL3P39023 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.21■□□□□ 0.83
RPL3P39023 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RPL3P39023 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.21■□□□□ 0.83
RPL3P39023 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPL3P39023 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RPL3P39023 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.21■□□□□ 0.83
RPL3P39023 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.21■□□□□ 0.83
RPL3P39023 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RPL3P39023 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RPL3P39023 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPL3P39023 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPL3P39023 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RPL3P39023 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPL3P39023 AC135279.3-201ENST00000610945 1311 ntBASIC20.2■□□□□ 0.82
RPL3P39023 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPL3P39023 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPL3P39023 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RPL3P39023 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPL3P39023 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RPL3P39023 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RPL3P39023 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.19■□□□□ 0.82
RPL3P39023 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPL3P39023 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RPL3P39023 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPL3P39023 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPL3P39023 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RPL3P39023 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.19■□□□□ 0.82
RPL3P39023 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RPL3P39023 AC126544.1-201ENST00000580842 1059 ntBASIC20.19■□□□□ 0.82
RPL3P39023 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RPL3P39023 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.19■□□□□ 0.82
RPL3P39023 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPL3P39023 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.19■□□□□ 0.82
RPL3P39023 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.19■□□□□ 0.82
RPL3P39023 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPL3P39023 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPL3P39023 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPL3P39023 AP006587.3-201ENST00000525742 1516 ntBASIC20.18■□□□□ 0.82
RPL3P39023 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPL3P39023 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.18■□□□□ 0.82
RPL3P39023 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.18■□□□□ 0.82
RPL3P39023 IGHV3-19-201ENST00000521488 291 ntBASIC20.18■□□□□ 0.82
RPL3P39023 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RPL3P39023 AC024257.2-201ENST00000549699 147 ntBASIC20.18■□□□□ 0.82
RPL3P39023 AC133561.4-201ENST00000566112 224 ntBASIC20.18■□□□□ 0.82
RPL3P39023 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.18■□□□□ 0.82
RPL3P39023 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
RPL3P39023 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.18■□□□□ 0.82
RPL3P39023 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPL3P39023 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms