Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RORAP35398 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.26■□□□□ 0.83
RORAP35398 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.26■□□□□ 0.83
RORAP35398 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.26■□□□□ 0.83
RORAP35398 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RORAP35398 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RORAP35398 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RORAP35398 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.26■□□□□ 0.83
RORAP35398 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RORAP35398 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.26■□□□□ 0.83
RORAP35398 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.25■□□□□ 0.83
RORAP35398 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RORAP35398 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RORAP35398 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.25■□□□□ 0.83
RORAP35398 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.25■□□□□ 0.83
RORAP35398 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.25■□□□□ 0.83
RORAP35398 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RORAP35398 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RORAP35398 MFSD11-216ENST00000590393 1141 ntBASIC20.25■□□□□ 0.83
RORAP35398 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.25■□□□□ 0.83
RORAP35398 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RORAP35398 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RORAP35398 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RORAP35398 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RORAP35398 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.24■□□□□ 0.83
RORAP35398 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RORAP35398 AC079834.2-201ENST00000609776 1949 ntBASIC20.24■□□□□ 0.83
RORAP35398 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RORAP35398 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RORAP35398 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RORAP35398 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RORAP35398 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.24■□□□□ 0.83
RORAP35398 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
RORAP35398 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.24■□□□□ 0.83
RORAP35398 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.24■□□□□ 0.83
RORAP35398 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.24■□□□□ 0.83
RORAP35398 AP001160.3-201ENST00000601484 763 ntBASIC20.24■□□□□ 0.83
RORAP35398 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RORAP35398 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RORAP35398 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RORAP35398 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.24■□□□□ 0.83
RORAP35398 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RORAP35398 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.23■□□□□ 0.83
RORAP35398 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RORAP35398 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RORAP35398 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.23■□□□□ 0.83
RORAP35398 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.23■□□□□ 0.83
RORAP35398 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RORAP35398 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RORAP35398 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RORAP35398 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RORAP35398 HLA-L-209ENST00000420110 1011 ntBASIC20.23■□□□□ 0.83
RORAP35398 CROCCP5-201ENST00000436658 830 ntBASIC20.23■□□□□ 0.83
RORAP35398 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RORAP35398 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.23■□□□□ 0.83
RORAP35398 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.23■□□□□ 0.83
RORAP35398 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.23■□□□□ 0.83
RORAP35398 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RORAP35398 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.23■□□□□ 0.83
RORAP35398 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.23■□□□□ 0.83
RORAP35398 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RORAP35398 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RORAP35398 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RORAP35398 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RORAP35398 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RORAP35398 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RORAP35398 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RORAP35398 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.23■□□□□ 0.83
RORAP35398 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RORAP35398 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RORAP35398 AP006587.3-201ENST00000525742 1516 ntBASIC20.22■□□□□ 0.83
RORAP35398 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RORAP35398 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RORAP35398 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.22■□□□□ 0.83
RORAP35398 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.22■□□□□ 0.83
RORAP35398 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RORAP35398 UBE2DNL-204ENST00000602536 740 ntBASIC20.22■□□□□ 0.83
RORAP35398 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.22■□□□□ 0.83
RORAP35398 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
RORAP35398 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RORAP35398 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.22■□□□□ 0.83
RORAP35398 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RORAP35398 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RORAP35398 CLDN5-201ENST00000403084 2357 ntBASIC20.21■□□□□ 0.83
RORAP35398 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RORAP35398 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.21■□□□□ 0.83
RORAP35398 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.21■□□□□ 0.83
RORAP35398 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.21■□□□□ 0.83
RORAP35398 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.21■□□□□ 0.83
RORAP35398 AC138907.5-202ENST00000569484 235 ntBASIC20.21■□□□□ 0.83
RORAP35398 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.21■□□□□ 0.83
RORAP35398 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.21■□□□□ 0.83
RORAP35398 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.21■□□□□ 0.83
RORAP35398 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.21■□□□□ 0.83
RORAP35398 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.21■□□□□ 0.83
RORAP35398 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RORAP35398 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RORAP35398 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RORAP35398 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RORAP35398 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms