Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PTPN6P29350 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN6P29350 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN6P29350 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN6P29350 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN6P29350 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN6P29350 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN6P29350 AC142381.2-201ENST00000566120 298 ntBASIC20.25■□□□□ 0.83
PTPN6P29350 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PTPN6P29350 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN6P29350 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.25■□□□□ 0.83
PTPN6P29350 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN6P29350 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN6P29350 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN6P29350 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PTPN6P29350 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN6P29350 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN6P29350 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN6P29350 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PTPN6P29350 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN6P29350 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN6P29350 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN6P29350 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PTPN6P29350 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN6P29350 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN6P29350 AP001330.3-201ENST00000520123 633 ntBASIC20.24■□□□□ 0.83
PTPN6P29350 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN6P29350 AC010525.1-201ENST00000585559 441 ntBASIC20.24■□□□□ 0.83
PTPN6P29350 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.24■□□□□ 0.83
PTPN6P29350 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN6P29350 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN6P29350 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN6P29350 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PTPN6P29350 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN6P29350 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN6P29350 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN6P29350 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN6P29350 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN6P29350 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN6P29350 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.23■□□□□ 0.83
PTPN6P29350 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN6P29350 AF213884.3-201ENST00000563833 479 ntBASIC20.23■□□□□ 0.83
PTPN6P29350 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN6P29350 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN6P29350 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PTPN6P29350 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN6P29350 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN6P29350 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN6P29350 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN6P29350 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.22■□□□□ 0.83
PTPN6P29350 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN6P29350 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
PTPN6P29350 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.22■□□□□ 0.83
PTPN6P29350 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN6P29350 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN6P29350 MIR939-201ENST00000401314 82 ntBASIC20.22■□□□□ 0.83
PTPN6P29350 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PTPN6P29350 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.22■□□□□ 0.83
PTPN6P29350 AL136967.2-201ENST00000623968 743 ntBASIC20.22■□□□□ 0.83
PTPN6P29350 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN6P29350 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.22■□□□□ 0.83
PTPN6P29350 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN6P29350 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN6P29350 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN6P29350 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN6P29350 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PTPN6P29350 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN6P29350 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN6P29350 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN6P29350 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN6P29350 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PTPN6P29350 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.21■□□□□ 0.83
PTPN6P29350 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.21■□□□□ 0.83
PTPN6P29350 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.21■□□□□ 0.83
PTPN6P29350 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN6P29350 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.21■□□□□ 0.83
PTPN6P29350 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN6P29350 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
PTPN6P29350 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN6P29350 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
PTPN6P29350 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN6P29350 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN6P29350 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PTPN6P29350 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN6P29350 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN6P29350 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN6P29350 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN6P29350 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.2■□□□□ 0.82
PTPN6P29350 AC010141.3-201ENST00000456659 717 ntBASIC20.2■□□□□ 0.82
PTPN6P29350 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.2■□□□□ 0.82
PTPN6P29350 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN6P29350 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PTPN6P29350 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN6P29350 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN6P29350 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN6P29350 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN6P29350 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PTPN6P29350 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPN6P29350 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PTPN6P29350 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms