Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SRMP19623 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.6■□□□□ 0.57
SRMP19623 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.6■□□□□ 0.57
SRMP19623 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRMP19623 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.6■□□□□ 0.57
SRMP19623 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SRMP19623 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SRMP19623 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.6■□□□□ 0.57
SRMP19623 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRMP19623 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRMP19623 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRMP19623 FEM1AP1-201ENST00000431297 1995 ntBASIC18.59■□□□□ 0.57
SRMP19623 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRMP19623 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SRMP19623 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SRMP19623 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SRMP19623 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SRMP19623 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRMP19623 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRMP19623 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SRMP19623 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRMP19623 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
SRMP19623 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SRMP19623 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
SRMP19623 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SRMP19623 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SRMP19623 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.58■□□□□ 0.57
SRMP19623 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.57
SRMP19623 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.58■□□□□ 0.56
SRMP19623 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SRMP19623 MTDHP2-201ENST00000601468 714 ntBASIC18.58■□□□□ 0.56
SRMP19623 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SRMP19623 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SRMP19623 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SRMP19623 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.58■□□□□ 0.56
SRMP19623 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
SRMP19623 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SRMP19623 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.58■□□□□ 0.56
SRMP19623 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SRMP19623 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SRMP19623 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRMP19623 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.57■□□□□ 0.56
SRMP19623 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRMP19623 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRMP19623 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.57■□□□□ 0.56
SRMP19623 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRMP19623 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.57■□□□□ 0.56
SRMP19623 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRMP19623 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRMP19623 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SRMP19623 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.57■□□□□ 0.56
SRMP19623 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SRMP19623 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SRMP19623 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRMP19623 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRMP19623 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRMP19623 AL049796.1-201ENST00000565336 1766 ntBASIC18.56■□□□□ 0.56
SRMP19623 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SRMP19623 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.56■□□□□ 0.56
SRMP19623 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SRMP19623 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.56■□□□□ 0.56
SRMP19623 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.56■□□□□ 0.56
SRMP19623 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRMP19623 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.56■□□□□ 0.56
SRMP19623 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRMP19623 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SRMP19623 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SRMP19623 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SRMP19623 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRMP19623 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRMP19623 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SRMP19623 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRMP19623 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SRMP19623 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRMP19623 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SRMP19623 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SRMP19623 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SRMP19623 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.55■□□□□ 0.56
SRMP19623 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRMP19623 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRMP19623 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRMP19623 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRMP19623 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.55■□□□□ 0.56
SRMP19623 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRMP19623 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.54■□□□□ 0.56
SRMP19623 AC133637.1-201ENST00000624115 1537 ntBASIC18.54■□□□□ 0.56
SRMP19623 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRMP19623 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRMP19623 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.54■□□□□ 0.56
SRMP19623 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRMP19623 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRMP19623 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRMP19623 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRMP19623 KRT125P-201ENST00000546827 989 ntBASIC18.54■□□□□ 0.56
SRMP19623 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.54■□□□□ 0.56
SRMP19623 AC241377.3-202ENST00000626088 1088 ntBASIC18.54■□□□□ 0.56
SRMP19623 AC241585.3-202ENST00000628937 1088 ntBASIC18.54■□□□□ 0.56
SRMP19623 AC245100.8-202ENST00000629247 1058 ntBASIC18.54■□□□□ 0.56
SRMP19623 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRMP19623 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms