Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC26.5■■□□□ 1.83
COL11A2P13942 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC26.5■■□□□ 1.83
COL11A2P13942 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
COL11A2P13942 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL11A2P13942 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL11A2P13942 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
COL11A2P13942 AC010980.2-201ENST00000587099 1412 ntBASIC26.49■■□□□ 1.83
COL11A2P13942 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL11A2P13942 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL11A2P13942 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC26.49■■□□□ 1.83
COL11A2P13942 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC26.49■■□□□ 1.83
COL11A2P13942 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
COL11A2P13942 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.49■■□□□ 1.83
COL11A2P13942 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL11A2P13942 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
COL11A2P13942 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
COL11A2P13942 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL11A2P13942 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
COL11A2P13942 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL11A2P13942 ESRRAP1-201ENST00000400596 1257 ntBASIC26.48■■□□□ 1.83
COL11A2P13942 AL158047.1-201ENST00000445918 881 ntBASIC26.48■■□□□ 1.83
COL11A2P13942 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC26.48■■□□□ 1.83
COL11A2P13942 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC26.48■■□□□ 1.83
COL11A2P13942 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC26.48■■□□□ 1.83
COL11A2P13942 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC26.48■■□□□ 1.83
COL11A2P13942 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC26.48■■□□□ 1.83
COL11A2P13942 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
COL11A2P13942 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL11A2P13942 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL11A2P13942 ANOS2P-203ENST00000472227 1816 ntBASIC26.48■■□□□ 1.83
COL11A2P13942 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL11A2P13942 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL11A2P13942 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL11A2P13942 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL11A2P13942 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC26.48■■□□□ 1.83
COL11A2P13942 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL11A2P13942 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
COL11A2P13942 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL11A2P13942 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL11A2P13942 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL11A2P13942 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
COL11A2P13942 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL11A2P13942 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL11A2P13942 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL11A2P13942 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL11A2P13942 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC26.47■■□□□ 1.83
COL11A2P13942 BET1L-207ENST00000529614 560 ntTSL 5 BASIC26.47■■□□□ 1.83
COL11A2P13942 UNC93B5-201ENST00000530315 699 ntBASIC26.47■■□□□ 1.83
COL11A2P13942 AC142381.4-202ENST00000563973 229 ntBASIC26.47■■□□□ 1.83
COL11A2P13942 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC26.47■■□□□ 1.83
COL11A2P13942 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC26.46■■□□□ 1.83
COL11A2P13942 RBM17P2-201ENST00000616397 1405 ntBASIC26.46■■□□□ 1.83
COL11A2P13942 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.46■■□□□ 1.83
COL11A2P13942 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
COL11A2P13942 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC26.45■■□□□ 1.83
COL11A2P13942 USP36-216ENST00000589424 970 ntTSL 5 BASIC26.45■■□□□ 1.83
COL11A2P13942 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC26.45■■□□□ 1.83
COL11A2P13942 MMD2-204ENST00000612910 778 ntTSL 5 BASIC26.45■■□□□ 1.83
COL11A2P13942 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC26.45■■□□□ 1.83
COL11A2P13942 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
COL11A2P13942 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
COL11A2P13942 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
COL11A2P13942 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.45■■□□□ 1.82
COL11A2P13942 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
COL11A2P13942 UNC93B4-201ENST00000505679 747 ntBASIC26.45■■□□□ 1.82
COL11A2P13942 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC26.45■■□□□ 1.82
COL11A2P13942 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
COL11A2P13942 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL11A2P13942 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
COL11A2P13942 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
COL11A2P13942 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC26.44■■□□□ 1.82
COL11A2P13942 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC26.44■■□□□ 1.82
COL11A2P13942 CASP6-205ENST00000505486 538 ntTSL 4 BASIC26.44■■□□□ 1.82
COL11A2P13942 AP003097.1-201ENST00000530657 1135 ntBASIC26.44■■□□□ 1.82
COL11A2P13942 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL11A2P13942 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26.44■■□□□ 1.82
COL11A2P13942 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
COL11A2P13942 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL11A2P13942 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL11A2P13942 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC26.43■■□□□ 1.82
COL11A2P13942 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.43■■□□□ 1.82
COL11A2P13942 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
COL11A2P13942 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC26.43■■□□□ 1.82
COL11A2P13942 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL11A2P13942 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL11A2P13942 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC26.43■■□□□ 1.82
COL11A2P13942 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26.43■■□□□ 1.82
COL11A2P13942 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL11A2P13942 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC26.42■■□□□ 1.82
COL11A2P13942 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC26.42■■□□□ 1.82
COL11A2P13942 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL11A2P13942 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
COL11A2P13942 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
COL11A2P13942 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC26.42■■□□□ 1.82
COL11A2P13942 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
COL11A2P13942 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
COL11A2P13942 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL11A2P13942 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.42■■□□□ 1.82
COL11A2P13942 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
COL11A2P13942 AC128676.1-201ENST00000454392 318 ntBASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms