Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CDH1P12830 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH1P12830 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH1P12830 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH1P12830 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH1P12830 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH1P12830 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDH1P12830 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.77■□□□□ 0.92
CDH1P12830 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.77■□□□□ 0.92
CDH1P12830 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH1P12830 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH1P12830 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH1P12830 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDH1P12830 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CDH1P12830 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDH1P12830 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH1P12830 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.76■□□□□ 0.91
CDH1P12830 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH1P12830 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH1P12830 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH1P12830 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CDH1P12830 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.76■□□□□ 0.91
CDH1P12830 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.76■□□□□ 0.91
CDH1P12830 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDH1P12830 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDH1P12830 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.76■□□□□ 0.91
CDH1P12830 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH1P12830 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.76■□□□□ 0.91
CDH1P12830 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH1P12830 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDH1P12830 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.76■□□□□ 0.91
CDH1P12830 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.76■□□□□ 0.91
CDH1P12830 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.76■□□□□ 0.91
CDH1P12830 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH1P12830 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.75■□□□□ 0.91
CDH1P12830 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.75■□□□□ 0.91
CDH1P12830 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.75■□□□□ 0.91
CDH1P12830 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH1P12830 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.75■□□□□ 0.91
CDH1P12830 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.75■□□□□ 0.91
CDH1P12830 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.75■□□□□ 0.91
CDH1P12830 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH1P12830 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH1P12830 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.74■□□□□ 0.91
CDH1P12830 AP004607.7-201ENST00000527152 1677 ntBASIC20.74■□□□□ 0.91
CDH1P12830 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH1P12830 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH1P12830 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CDH1P12830 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.74■□□□□ 0.91
CDH1P12830 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH1P12830 AC026310.3-201ENST00000625186 2373 ntBASIC20.74■□□□□ 0.91
CDH1P12830 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH1P12830 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH1P12830 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH1P12830 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CDH1P12830 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH1P12830 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH1P12830 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH1P12830 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH1P12830 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.73■□□□□ 0.91
CDH1P12830 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH1P12830 FAM99A-202ENST00000538190 1989 ntBASIC20.73■□□□□ 0.91
CDH1P12830 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH1P12830 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH1P12830 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH1P12830 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH1P12830 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH1P12830 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH1P12830 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH1P12830 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH1P12830 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH1P12830 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.72■□□□□ 0.91
CDH1P12830 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.72■□□□□ 0.91
CDH1P12830 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.72■□□□□ 0.91
CDH1P12830 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.72■□□□□ 0.91
CDH1P12830 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CDH1P12830 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH1P12830 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.72■□□□□ 0.91
CDH1P12830 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.71■□□□□ 0.91
CDH1P12830 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH1P12830 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDH1P12830 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH1P12830 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH1P12830 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDH1P12830 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDH1P12830 IRS3P-201ENST00000223076 1006 ntBASIC20.71■□□□□ 0.91
CDH1P12830 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH1P12830 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.71■□□□□ 0.91
CDH1P12830 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH1P12830 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH1P12830 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDH1P12830 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH1P12830 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH1P12830 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH1P12830 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.71■□□□□ 0.91
CDH1P12830 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CDH1P12830 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
CDH1P12830 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.7■□□□□ 0.9
CDH1P12830 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH1P12830 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms