Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP4P12644 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
BMP4P12644 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
BMP4P12644 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
BMP4P12644 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.45■□□□□ 0.7
BMP4P12644 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.45■□□□□ 0.7
BMP4P12644 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP4P12644 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP4P12644 AC244015.2-201ENST00000616358 1861 ntBASIC19.45■□□□□ 0.7
BMP4P12644 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP4P12644 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP4P12644 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP4P12644 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP4P12644 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP4P12644 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP4P12644 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP4P12644 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
BMP4P12644 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BMP4P12644 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP4P12644 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.44■□□□□ 0.7
BMP4P12644 AL355001.2-201ENST00000620617 1191 ntBASIC19.44■□□□□ 0.7
BMP4P12644 AC241377.3-202ENST00000626088 1088 ntBASIC19.44■□□□□ 0.7
BMP4P12644 AC241585.3-202ENST00000628937 1088 ntBASIC19.44■□□□□ 0.7
BMP4P12644 AC245100.8-202ENST00000629247 1058 ntBASIC19.44■□□□□ 0.7
BMP4P12644 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP4P12644 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP4P12644 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BMP4P12644 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BMP4P12644 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP4P12644 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BMP4P12644 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.43■□□□□ 0.7
BMP4P12644 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
BMP4P12644 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.43■□□□□ 0.7
BMP4P12644 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BMP4P12644 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.43■□□□□ 0.7
BMP4P12644 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
BMP4P12644 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BMP4P12644 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.43■□□□□ 0.7
BMP4P12644 LINC01006-201ENST00000333319 2292 ntBASIC19.43■□□□□ 0.7
BMP4P12644 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BMP4P12644 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
BMP4P12644 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.43■□□□□ 0.7
BMP4P12644 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BMP4P12644 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
BMP4P12644 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BMP4P12644 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BMP4P12644 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BMP4P12644 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BMP4P12644 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.43■□□□□ 0.7
BMP4P12644 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.43■□□□□ 0.7
BMP4P12644 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.42■□□□□ 0.7
BMP4P12644 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BMP4P12644 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
BMP4P12644 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BMP4P12644 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.42■□□□□ 0.7
BMP4P12644 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BMP4P12644 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BMP4P12644 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.42■□□□□ 0.7
BMP4P12644 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
BMP4P12644 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BMP4P12644 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
BMP4P12644 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BMP4P12644 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BMP4P12644 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BMP4P12644 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BMP4P12644 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BMP4P12644 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.41■□□□□ 0.7
BMP4P12644 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BMP4P12644 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
BMP4P12644 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
BMP4P12644 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BMP4P12644 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.41■□□□□ 0.7
BMP4P12644 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BMP4P12644 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.41■□□□□ 0.7
BMP4P12644 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
BMP4P12644 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BMP4P12644 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.41■□□□□ 0.7
BMP4P12644 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BMP4P12644 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BMP4P12644 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BMP4P12644 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BMP4P12644 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.4■□□□□ 0.7
BMP4P12644 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.4■□□□□ 0.7
BMP4P12644 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BMP4P12644 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BMP4P12644 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.4■□□□□ 0.7
BMP4P12644 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BMP4P12644 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.4■□□□□ 0.7
BMP4P12644 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BMP4P12644 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BMP4P12644 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
BMP4P12644 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BMP4P12644 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
BMP4P12644 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
BMP4P12644 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
BMP4P12644 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.39■□□□□ 0.7
BMP4P12644 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
BMP4P12644 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BMP4P12644 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BMP4P12644 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms