Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CD28P10747 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD28P10747 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.68■□□□□ 0.26
CD28P10747 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.68■□□□□ 0.26
CD28P10747 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.68■□□□□ 0.26
CD28P10747 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.68■□□□□ 0.26
CD28P10747 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD28P10747 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD28P10747 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CD28P10747 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD28P10747 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD28P10747 GPX1P1-201ENST00000388829 606 ntBASIC16.67■□□□□ 0.26
CD28P10747 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.67■□□□□ 0.26
CD28P10747 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.67■□□□□ 0.26
CD28P10747 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.67■□□□□ 0.26
CD28P10747 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.67■□□□□ 0.26
CD28P10747 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.67■□□□□ 0.26
CD28P10747 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD28P10747 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.67■□□□□ 0.26
CD28P10747 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CD28P10747 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD28P10747 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD28P10747 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD28P10747 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD28P10747 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD28P10747 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CD28P10747 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.66■□□□□ 0.26
CD28P10747 AC007322.1-201ENST00000426983 750 ntBASIC16.66■□□□□ 0.26
CD28P10747 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD28P10747 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.66■□□□□ 0.26
CD28P10747 DUX4L16-201ENST00000555130 1264 ntBASIC16.66■□□□□ 0.26
CD28P10747 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.66■□□□□ 0.26
CD28P10747 MYCNOS-205ENST00000641950 531 ntBASIC16.66■□□□□ 0.26
CD28P10747 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD28P10747 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD28P10747 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD28P10747 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD28P10747 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD28P10747 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CD28P10747 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD28P10747 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CD28P10747 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD28P10747 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD28P10747 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD28P10747 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD28P10747 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD28P10747 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD28P10747 AC231657.2-201ENST00000624556 255 ntBASIC16.65■□□□□ 0.26
CD28P10747 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD28P10747 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD28P10747 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD28P10747 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD28P10747 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CD28P10747 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD28P10747 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.65■□□□□ 0.26
CD28P10747 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD28P10747 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.64■□□□□ 0.26
CD28P10747 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CD28P10747 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.64■□□□□ 0.25
CD28P10747 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD28P10747 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.64■□□□□ 0.25
CD28P10747 AL034346.1-201ENST00000568244 1277 ntBASIC16.64■□□□□ 0.25
CD28P10747 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.64■□□□□ 0.25
CD28P10747 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD28P10747 AL050303.2-201ENST00000619798 666 ntBASIC16.64■□□□□ 0.25
CD28P10747 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.64■□□□□ 0.25
CD28P10747 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.64■□□□□ 0.25
CD28P10747 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.64■□□□□ 0.25
CD28P10747 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.64■□□□□ 0.25
CD28P10747 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD28P10747 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD28P10747 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD28P10747 AC010141.2-201ENST00000452426 721 ntBASIC16.63■□□□□ 0.25
CD28P10747 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD28P10747 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.63■□□□□ 0.25
CD28P10747 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD28P10747 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CD28P10747 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.63■□□□□ 0.25
CD28P10747 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD28P10747 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.63■□□□□ 0.25
CD28P10747 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.63■□□□□ 0.25
CD28P10747 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD28P10747 AC005181.1-201ENST00000604782 1256 ntBASIC16.63■□□□□ 0.25
CD28P10747 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CD28P10747 AL121832.2-201ENST00000610979 668 ntBASIC16.63■□□□□ 0.25
CD28P10747 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD28P10747 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.63■□□□□ 0.25
CD28P10747 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD28P10747 AC133561.1-201ENST00000568600 2415 ntBASIC16.62■□□□□ 0.25
CD28P10747 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CD28P10747 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD28P10747 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CD28P10747 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD28P10747 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD28P10747 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD28P10747 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.62■□□□□ 0.25
CD28P10747 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.62■□□□□ 0.25
CD28P10747 AC083906.2-201ENST00000511578 360 ntBASIC16.62■□□□□ 0.25
CD28P10747 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.62■□□□□ 0.25
CD28P10747 AC138907.5-202ENST00000569484 235 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms