Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PF4V1P10720 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.86■□□□□ 0.29
PF4V1P10720 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.86■□□□□ 0.29
PF4V1P10720 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.86■□□□□ 0.29
PF4V1P10720 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PF4V1P10720 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.86■□□□□ 0.29
PF4V1P10720 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PF4V1P10720 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PF4V1P10720 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PF4V1P10720 AC127496.7-201ENST00000625110 1798 ntBASIC16.86■□□□□ 0.29
PF4V1P10720 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.86■□□□□ 0.29
PF4V1P10720 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.86■□□□□ 0.29
PF4V1P10720 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PF4V1P10720 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PF4V1P10720 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PF4V1P10720 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.86■□□□□ 0.29
PF4V1P10720 LINC00526-201ENST00000581067 1875 ntBASIC16.86■□□□□ 0.29
PF4V1P10720 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.86■□□□□ 0.29
PF4V1P10720 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PF4V1P10720 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.86■□□□□ 0.29
PF4V1P10720 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.86■□□□□ 0.29
PF4V1P10720 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PF4V1P10720 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PF4V1P10720 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PF4V1P10720 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.85■□□□□ 0.29
PF4V1P10720 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
PF4V1P10720 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PF4V1P10720 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.85■□□□□ 0.29
PF4V1P10720 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.85■□□□□ 0.29
PF4V1P10720 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.85■□□□□ 0.29
PF4V1P10720 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PF4V1P10720 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PF4V1P10720 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PF4V1P10720 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PF4V1P10720 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.85■□□□□ 0.29
PF4V1P10720 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PF4V1P10720 AP004607.7-201ENST00000527152 1677 ntBASIC16.85■□□□□ 0.29
PF4V1P10720 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PF4V1P10720 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PF4V1P10720 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PF4V1P10720 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PF4V1P10720 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PF4V1P10720 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
PF4V1P10720 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.84■□□□□ 0.29
PF4V1P10720 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PF4V1P10720 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.84■□□□□ 0.29
PF4V1P10720 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.84■□□□□ 0.29
PF4V1P10720 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PF4V1P10720 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PF4V1P10720 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PF4V1P10720 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
PF4V1P10720 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PF4V1P10720 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PF4V1P10720 AC080038.3-201ENST00000623346 1952 ntBASIC16.84■□□□□ 0.29
PF4V1P10720 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PF4V1P10720 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PF4V1P10720 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PF4V1P10720 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PF4V1P10720 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
PF4V1P10720 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PF4V1P10720 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PF4V1P10720 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PF4V1P10720 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.83■□□□□ 0.28
PF4V1P10720 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.83■□□□□ 0.28
PF4V1P10720 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PF4V1P10720 AL034346.1-201ENST00000568244 1277 ntBASIC16.83■□□□□ 0.28
PF4V1P10720 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PF4V1P10720 AIRN-201ENST00000601203 4374 ntBASIC16.83■□□□□ 0.28
PF4V1P10720 AC133561.1-201ENST00000568600 2415 ntBASIC16.82■□□□□ 0.28
PF4V1P10720 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.82■□□□□ 0.28
PF4V1P10720 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PF4V1P10720 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PF4V1P10720 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.82■□□□□ 0.28
PF4V1P10720 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PF4V1P10720 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PF4V1P10720 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PF4V1P10720 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PF4V1P10720 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PF4V1P10720 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PF4V1P10720 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PF4V1P10720 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.82■□□□□ 0.28
PF4V1P10720 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PF4V1P10720 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.82■□□□□ 0.28
PF4V1P10720 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.82■□□□□ 0.28
PF4V1P10720 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.82■□□□□ 0.28
PF4V1P10720 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PF4V1P10720 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PF4V1P10720 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PF4V1P10720 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PF4V1P10720 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PF4V1P10720 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PF4V1P10720 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PF4V1P10720 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PF4V1P10720 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PF4V1P10720 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PF4V1P10720 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PF4V1P10720 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PF4V1P10720 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PF4V1P10720 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
PF4V1P10720 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms