Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC30.88■■■□□ 2.53
CHGAP10645 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC30.88■■■□□ 2.53
CHGAP10645 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
CHGAP10645 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC30.88■■■□□ 2.53
CHGAP10645 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
CHGAP10645 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CHGAP10645 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC30.87■■■□□ 2.53
CHGAP10645 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
CHGAP10645 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC30.87■■■□□ 2.53
CHGAP10645 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC30.87■■■□□ 2.53
CHGAP10645 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC30.87■■■□□ 2.53
CHGAP10645 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC30.86■■■□□ 2.53
CHGAP10645 KRT18P29-201ENST00000397031 1267 ntBASIC30.86■■■□□ 2.53
CHGAP10645 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC30.86■■■□□ 2.53
CHGAP10645 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC30.86■■■□□ 2.53
CHGAP10645 AC008694.1-202ENST00000636953 945 ntBASIC30.86■■■□□ 2.53
CHGAP10645 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC30.86■■■□□ 2.53
CHGAP10645 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
CHGAP10645 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CHGAP10645 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
CHGAP10645 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC30.85■■■□□ 2.53
CHGAP10645 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CHGAP10645 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC30.85■■■□□ 2.53
CHGAP10645 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC30.85■■■□□ 2.53
CHGAP10645 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC30.85■■■□□ 2.53
CHGAP10645 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC30.85■■■□□ 2.53
CHGAP10645 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CHGAP10645 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CHGAP10645 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
CHGAP10645 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC30.84■■■□□ 2.53
CHGAP10645 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC30.84■■■□□ 2.53
CHGAP10645 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC30.84■■■□□ 2.53
CHGAP10645 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CHGAP10645 AC007322.4-201ENST00000509611 723 ntBASIC30.84■■■□□ 2.53
CHGAP10645 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC30.84■■■□□ 2.53
CHGAP10645 ITM2C-210ENST00000620962 501 ntBASIC30.84■■■□□ 2.53
CHGAP10645 OR10C1-204ENST00000622521 1039 ntBASIC30.84■■■□□ 2.53
CHGAP10645 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC30.84■■■□□ 2.53
CHGAP10645 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CHGAP10645 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
CHGAP10645 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
CHGAP10645 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CHGAP10645 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CHGAP10645 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC30.83■■■□□ 2.53
CHGAP10645 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
CHGAP10645 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CHGAP10645 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CHGAP10645 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CHGAP10645 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
CHGAP10645 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CHGAP10645 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CHGAP10645 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
CHGAP10645 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CHGAP10645 BX276092.2-201ENST00000417668 665 ntBASIC30.82■■■□□ 2.52
CHGAP10645 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC30.82■■■□□ 2.52
CHGAP10645 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC30.82■■■□□ 2.52
CHGAP10645 AC069236.1-201ENST00000604339 616 ntBASIC30.82■■■□□ 2.52
CHGAP10645 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC30.82■■■□□ 2.52
CHGAP10645 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CHGAP10645 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC30.81■■■□□ 2.52
CHGAP10645 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CHGAP10645 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CHGAP10645 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC30.81■■■□□ 2.52
CHGAP10645 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
CHGAP10645 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC30.81■■■□□ 2.52
CHGAP10645 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC30.81■■■□□ 2.52
CHGAP10645 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC30.81■■■□□ 2.52
CHGAP10645 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CHGAP10645 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC30.81■■■□□ 2.52
CHGAP10645 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CHGAP10645 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CHGAP10645 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CHGAP10645 PRORSD1P-201ENST00000295112 541 ntBASIC30.8■■■□□ 2.52
CHGAP10645 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC30.8■■■□□ 2.52
CHGAP10645 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC30.8■■■□□ 2.52
CHGAP10645 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC30.8■■■□□ 2.52
CHGAP10645 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC30.8■■■□□ 2.52
CHGAP10645 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
CHGAP10645 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
CHGAP10645 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
CHGAP10645 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CHGAP10645 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC30.79■■■□□ 2.52
CHGAP10645 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC30.79■■■□□ 2.52
CHGAP10645 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
CHGAP10645 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CHGAP10645 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CHGAP10645 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC30.79■■■□□ 2.52
CHGAP10645 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CHGAP10645 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC30.79■■■□□ 2.52
CHGAP10645 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC30.79■■■□□ 2.52
CHGAP10645 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
CHGAP10645 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CHGAP10645 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC30.78■■■□□ 2.52
CHGAP10645 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CHGAP10645 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CHGAP10645 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC30.78■■■□□ 2.52
CHGAP10645 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC30.78■■■□□ 2.52
CHGAP10645 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC30.78■■■□□ 2.52
CHGAP10645 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC30.78■■■□□ 2.52
CHGAP10645 AC092118.2-201ENST00000613495 667 ntBASIC30.78■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms