Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 OR2I1P-207ENST00000453522 948 ntBASIC18.11■□□□□ 0.49
ZNF728P0DKX0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.11■□□□□ 0.49
ZNF728P0DKX0 MIR4767-201ENST00000582827 78 ntBASIC18.11■□□□□ 0.49
ZNF728P0DKX0 AC110285.6-201ENST00000617652 491 ntBASIC18.11■□□□□ 0.49
ZNF728P0DKX0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF728P0DKX0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ZNF728P0DKX0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF728P0DKX0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF728P0DKX0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF728P0DKX0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF728P0DKX0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF728P0DKX0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF728P0DKX0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF728P0DKX0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF728P0DKX0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF728P0DKX0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF728P0DKX0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF728P0DKX0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
ZNF728P0DKX0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF728P0DKX0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF728P0DKX0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
ZNF728P0DKX0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF728P0DKX0 AC106739.1-201ENST00000617035 715 ntBASIC18.1■□□□□ 0.49
ZNF728P0DKX0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF728P0DKX0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF728P0DKX0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
ZNF728P0DKX0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 AL139246.5-201ENST00000606645 996 ntBASIC18.09■□□□□ 0.49
ZNF728P0DKX0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ZNF728P0DKX0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF728P0DKX0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF728P0DKX0 SLC25A24-204ENST00000569674 2357 ntBASIC18.08■□□□□ 0.48
ZNF728P0DKX0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF728P0DKX0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF728P0DKX0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ZNF728P0DKX0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.08■□□□□ 0.48
ZNF728P0DKX0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.08■□□□□ 0.48
ZNF728P0DKX0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF728P0DKX0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF728P0DKX0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF728P0DKX0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF728P0DKX0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF728P0DKX0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.08■□□□□ 0.48
ZNF728P0DKX0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF728P0DKX0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF728P0DKX0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF728P0DKX0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF728P0DKX0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF728P0DKX0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF728P0DKX0 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.07■□□□□ 0.48
ZNF728P0DKX0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.07■□□□□ 0.48
ZNF728P0DKX0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF728P0DKX0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF728P0DKX0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF728P0DKX0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF728P0DKX0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
ZNF728P0DKX0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ZNF728P0DKX0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF728P0DKX0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.07■□□□□ 0.48
ZNF728P0DKX0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF728P0DKX0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF728P0DKX0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF728P0DKX0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF728P0DKX0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.06■□□□□ 0.48
ZNF728P0DKX0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF728P0DKX0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF728P0DKX0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF728P0DKX0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF728P0DKX0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF728P0DKX0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF728P0DKX0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF728P0DKX0 CA15P2-201ENST00000611168 834 ntBASIC18.06■□□□□ 0.48
ZNF728P0DKX0 AC068587.7-201ENST00000641602 218 ntBASIC18.06■□□□□ 0.48
ZNF728P0DKX0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ZNF728P0DKX0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF728P0DKX0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms