Protein–RNA interactions for Protein: P0CX47

RPS11A, 40S ribosomal protein S11-A, yeastyeast

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS11AP0CX47 MYO5YMR109W 3660 nt1.9□□□□□ -2.1
RPS11AP0CX47 VPS27YNR006W 1869 nt1.9□□□□□ -2.1
RPS11AP0CX47 MIH1YMR036C 1665 nt1.9□□□□□ -2.1
RPS11AP0CX47 RKM3YBR030W 1659 nt1.9□□□□□ -2.1
RPS11AP0CX47 CDC55YGL190C 1581 nt1.9□□□□□ -2.1
RPS11AP0CX47 XRN1YGL173C 4587 nt1.9□□□□□ -2.11
RPS11AP0CX47 YHR213WYHR213W 597 nt1.9□□□□□ -2.11
RPS11AP0CX47 tW(CCA)G1tW(CCA)G1 72 nt1.9□□□□□ -2.11
RPS11AP0CX47 tW(CCA)G2tW(CCA)G2 72 nt1.9□□□□□ -2.11
RPS11AP0CX47 tW(CCA)JtW(CCA)J 72 nt1.9□□□□□ -2.11
RPS11AP0CX47 tW(CCA)KtW(CCA)K 72 nt1.9□□□□□ -2.11
RPS11AP0CX47 tW(CCA)MtW(CCA)M 72 nt1.9□□□□□ -2.11
RPS11AP0CX47 tW(CCA)PtW(CCA)P 72 nt1.9□□□□□ -2.11
RPS11AP0CX47 SDP1YIL113W 630 nt1.9□□□□□ -2.11
RPS11AP0CX47 YAR062WYAR062W 597 nt1.9□□□□□ -2.11
RPS11AP0CX47 YLR347W-AYLR347W-A 141 nt1.9□□□□□ -2.11
RPS11AP0CX47 YOL079WYOL079W 399 nt1.9□□□□□ -2.11
RPS11AP0CX47 VAC8YEL013W 1737 nt1.9□□□□□ -2.11
RPS11AP0CX47 MSM1YGR171C 1728 nt1.9□□□□□ -2.11
RPS11AP0CX47 ALG11YNL048W 1647 nt1.9□□□□□ -2.11
RPS11AP0CX47 PDR11YIL013C 4236 nt1.89□□□□□ -2.11
RPS11AP0CX47 NSA1YGL111W 1392 nt1.89□□□□□ -2.11
RPS11AP0CX47 PEX6YNL329C 3093 nt1.89□□□□□ -2.11
RPS11AP0CX47 snR70snR70 164 nt1.89□□□□□ -2.11
RPS11AP0CX47 YGL218WYGL218W 651 nt1.89□□□□□ -2.11
RPS11AP0CX47 MDV1YJL112W 2145 nt1.89□□□□□ -2.11
RPS11AP0CX47 AIM25YJR100C 984 nt1.89□□□□□ -2.11
RPS11AP0CX47 SWD2YKL018W 990 nt1.89□□□□□ -2.11
RPS11AP0CX47 YAL065CYAL065C 387 nt1.89□□□□□ -2.11
RPS11AP0CX47 HTA2YBL003C 399 nt1.89□□□□□ -2.11
RPS11AP0CX47 HPA2YPR193C 471 nt1.89□□□□□ -2.11
RPS11AP0CX47 DUF1YOL087C 3351 nt1.89□□□□□ -2.11
RPS11AP0CX47 PRP3YDR473C 1410 nt1.89□□□□□ -2.11
RPS11AP0CX47 NFT1YKR103W 3657 nt1.88□□□□□ -2.11
RPS11AP0CX47 PRM15YMR278W 1869 nt1.88□□□□□ -2.11
RPS11AP0CX47 MRD1YPR112C 2664 nt1.88□□□□□ -2.11
RPS11AP0CX47 SET4YJL105W 1683 nt1.88□□□□□ -2.11
RPS11AP0CX47 PEX18YHR160C 852 nt1.88□□□□□ -2.11
RPS11AP0CX47 SFH5YJL145W 885 nt1.88□□□□□ -2.11
RPS11AP0CX47 DCS1YLR270W 1053 nt1.88□□□□□ -2.11
RPS11AP0CX47 YLR326WYLR326W 723 nt1.88□□□□□ -2.11
RPS11AP0CX47 AIM39YOL053W 1188 nt1.88□□□□□ -2.11
RPS11AP0CX47 YOR050CYOR050C 348 nt1.88□□□□□ -2.11
RPS11AP0CX47 RPB8YOR224C 441 nt1.88□□□□□ -2.11
RPS11AP0CX47 RRD2YPL152W 1077 nt1.88□□□□□ -2.11
RPS11AP0CX47 AFT2YPL202C 1251 nt1.88□□□□□ -2.11
RPS11AP0CX47 ARP8YOR141C 2646 nt1.87□□□□□ -2.11
RPS11AP0CX47 NHP10YDL002C 612 nt1.87□□□□□ -2.11
RPS11AP0CX47 COG1YGL223C 1254 nt1.87□□□□□ -2.11
RPS11AP0CX47 YHR032W-AYHR032W-A 180 nt1.87□□□□□ -2.11
RPS11AP0CX47 ARG2YJL071W 1725 nt1.87□□□□□ -2.11
RPS11AP0CX47 SSN8YNL025C 972 nt1.87□□□□□ -2.11
RPS11AP0CX47 MIC27YNL100W 705 nt1.87□□□□□ -2.11
RPS11AP0CX47 TAF14YPL129W 735 nt1.87□□□□□ -2.11
RPS11AP0CX47 PBP2YBR233W 1242 nt1.87□□□□□ -2.11
RPS11AP0CX47 PUF2YPR042C 3228 nt1.87□□□□□ -2.11
RPS11AP0CX47 BUD6YLR319C 2367 nt1.86□□□□□ -2.11
RPS11AP0CX47 SWC4YGR002C 1431 nt1.86□□□□□ -2.11
RPS11AP0CX47 CSF1YLR087C 8877 nt1.86□□□□□ -2.11
RPS11AP0CX47 SEC15YGL233W 2733 nt1.86□□□□□ -2.11
RPS11AP0CX47 YLR446WYLR446W 1302 nt1.86□□□□□ -2.11
RPS11AP0CX47 NDC80YIL144W 2076 nt1.86□□□□□ -2.11
RPS11AP0CX47 NEW1YPL226W 3591 nt1.85□□□□□ -2.11
RPS11AP0CX47 CLB3YDL155W 1284 nt1.85□□□□□ -2.11
RPS11AP0CX47 YDL183CYDL183C 963 nt1.85□□□□□ -2.11
RPS11AP0CX47 MST27YGL051W 705 nt1.85□□□□□ -2.11
RPS11AP0CX47 ERV29YGR284C 933 nt1.85□□□□□ -2.11
RPS11AP0CX47 GLG2YJL137C 1143 nt1.85□□□□□ -2.11
RPS11AP0CX47 EMC6YLL014W 327 nt1.85□□□□□ -2.11
RPS11AP0CX47 SED5YLR026C 1023 nt1.85□□□□□ -2.11
RPS11AP0CX47 MST28YAR033W 705 nt1.85□□□□□ -2.11
RPS11AP0CX47 BUR2YLR226W 1188 nt1.85□□□□□ -2.11
RPS11AP0CX47 REC102YLR329W 795 nt1.85□□□□□ -2.11
RPS11AP0CX47 GLO1YML004C 981 nt1.85□□□□□ -2.11
RPS11AP0CX47 SWP1YMR149W 861 nt1.85□□□□□ -2.11
RPS11AP0CX47 ATG29YPL166W 642 nt1.85□□□□□ -2.11
RPS11AP0CX47 YTH1YPR107C 627 nt1.85□□□□□ -2.11
RPS11AP0CX47 URC2YDR520C 2319 nt1.85□□□□□ -2.11
RPS11AP0CX47 KEL2YGR238C 2649 nt1.85□□□□□ -2.11
RPS11AP0CX47 ATP25YMR098C 1839 nt1.84□□□□□ -2.11
RPS11AP0CX47 UBP8YMR223W 1416 nt1.84□□□□□ -2.11
RPS11AP0CX47 SMC2YFR031C 3513 nt1.84□□□□□ -2.11
RPS11AP0CX47 YIL047C-AYIL047C-A 369 nt1.84□□□□□ -2.11
RPS11AP0CX47 SYS1YJL004C 612 nt1.84□□□□□ -2.11
RPS11AP0CX47 ATP11YNL315C 957 nt1.84□□□□□ -2.11
RPS11AP0CX47 RSM19YNR037C 276 nt1.84□□□□□ -2.11
RPS11AP0CX47 YOR055WYOR055W 435 nt1.84□□□□□ -2.11
RPS11AP0CX47 NUP170YBL079W 4509 nt1.84□□□□□ -2.11
RPS11AP0CX47 SAD1YFR005C 1347 nt1.84□□□□□ -2.12
RPS11AP0CX47 EPO1YMR124W 2832 nt1.84□□□□□ -2.12
RPS11AP0CX47 BUB1YGR188C 3066 nt1.84□□□□□ -2.12
RPS11AP0CX47 AIM14YGL160W 1713 nt1.83□□□□□ -2.12
RPS11AP0CX47 ERP3YDL018C 678 nt1.83□□□□□ -2.12
RPS11AP0CX47 YDL032WYDL032W 312 nt1.83□□□□□ -2.12
RPS11AP0CX47 SAW1YAL027W 786 nt1.83□□□□□ -2.12
RPS11AP0CX47 YJR056CYJR056C 711 nt1.83□□□□□ -2.12
RPS11AP0CX47 YLR365WYLR365W 333 nt1.83□□□□□ -2.12
RPS11AP0CX47 YNR062CYNR062C 984 nt1.83□□□□□ -2.12
RPS11AP0CX47 TUM1YOR251C 915 nt1.83□□□□□ -2.12
RPS11AP0CX47 YPR027CYPR027C 834 nt1.83□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 19.2 ms