Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.56■■□□□ 1.04
RETP07949 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.56■■□□□ 1.04
RETP07949 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RETP07949 OXCT2P1-201ENST00000447263 1535 ntBASIC21.56■■□□□ 1.04
RETP07949 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RETP07949 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RETP07949 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RETP07949 CNN2P6-201ENST00000439038 900 ntBASIC21.56■■□□□ 1.04
RETP07949 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RETP07949 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RETP07949 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RETP07949 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RETP07949 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RETP07949 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RETP07949 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RETP07949 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RETP07949 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RETP07949 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.55■■□□□ 1.04
RETP07949 AP001160.3-201ENST00000601484 763 ntBASIC21.55■■□□□ 1.04
RETP07949 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.55■■□□□ 1.04
RETP07949 AC005224.4-201ENST00000583262 1652 ntBASIC21.55■■□□□ 1.04
RETP07949 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.55■■□□□ 1.04
RETP07949 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.55■■□□□ 1.04
RETP07949 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.55■■□□□ 1.04
RETP07949 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
RETP07949 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.55■■□□□ 1.04
RETP07949 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RETP07949 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.55■■□□□ 1.04
RETP07949 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RETP07949 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.55■■□□□ 1.04
RETP07949 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RETP07949 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RETP07949 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.54■■□□□ 1.04
RETP07949 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.54■■□□□ 1.04
RETP07949 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RETP07949 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RETP07949 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.54■■□□□ 1.04
RETP07949 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RETP07949 ANOS2P-203ENST00000472227 1816 ntBASIC21.54■■□□□ 1.04
RETP07949 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.54■■□□□ 1.04
RETP07949 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RETP07949 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RETP07949 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RETP07949 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.54■■□□□ 1.04
RETP07949 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETP07949 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETP07949 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETP07949 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETP07949 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETP07949 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETP07949 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
RETP07949 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETP07949 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.53■■□□□ 1.04
RETP07949 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETP07949 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.53■■□□□ 1.04
RETP07949 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RETP07949 AC004687.1-201ENST00000579003 1625 ntBASIC21.53■■□□□ 1.04
RETP07949 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RETP07949 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETP07949 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RETP07949 AC009237.3-201ENST00000393279 1427 ntBASIC21.53■■□□□ 1.04
RETP07949 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RETP07949 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RETP07949 AC092068.2-201ENST00000590491 1708 ntBASIC21.52■■□□□ 1.04
RETP07949 DUSP5P2-201ENST00000426873 1033 ntBASIC21.52■■□□□ 1.04
RETP07949 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.52■■□□□ 1.04
RETP07949 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
RETP07949 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RETP07949 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RETP07949 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
RETP07949 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RETP07949 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETP07949 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RETP07949 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RETP07949 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETP07949 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.51■■□□□ 1.03
RETP07949 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETP07949 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RETP07949 AC098590.1-201ENST00000468126 897 ntBASIC21.51■■□□□ 1.03
RETP07949 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RETP07949 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.51■■□□□ 1.03
RETP07949 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.51■■□□□ 1.03
RETP07949 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.51■■□□□ 1.03
RETP07949 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETP07949 DUSP8P3-201ENST00000399571 1760 ntBASIC21.51■■□□□ 1.03
RETP07949 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RETP07949 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETP07949 AC233723.2-201ENST00000623798 2106 ntBASIC21.5■■□□□ 1.03
RETP07949 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.5■■□□□ 1.03
RETP07949 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETP07949 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.5■■□□□ 1.03
RETP07949 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.5■■□□□ 1.03
RETP07949 SLC7A5P1-201ENST00000568957 537 ntBASIC21.5■■□□□ 1.03
RETP07949 AC010536.3-201ENST00000620306 533 ntBASIC21.5■■□□□ 1.03
RETP07949 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RETP07949 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETP07949 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
RETP07949 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.49■■□□□ 1.03
RETP07949 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETP07949 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms