Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC28.5■■■□□ 2.15
COL5A2P05997 AC097658.1-201ENST00000475555 843 ntBASIC28.5■■■□□ 2.15
COL5A2P05997 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
COL5A2P05997 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC28.5■■■□□ 2.15
COL5A2P05997 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC28.5■■■□□ 2.15
COL5A2P05997 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC28.5■■■□□ 2.15
COL5A2P05997 AP006294.2-201ENST00000641667 209 ntBASIC28.5■■■□□ 2.15
COL5A2P05997 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
COL5A2P05997 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
COL5A2P05997 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
COL5A2P05997 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
COL5A2P05997 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
COL5A2P05997 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC28.49■■■□□ 2.15
COL5A2P05997 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC28.49■■■□□ 2.15
COL5A2P05997 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC28.49■■■□□ 2.15
COL5A2P05997 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
COL5A2P05997 INO80E-214ENST00000620599 515 ntTSL 2 BASIC28.49■■■□□ 2.15
COL5A2P05997 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC28.49■■■□□ 2.15
COL5A2P05997 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
COL5A2P05997 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
COL5A2P05997 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
COL5A2P05997 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC28.49■■■□□ 2.15
COL5A2P05997 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
COL5A2P05997 AC010980.2-201ENST00000587099 1412 ntBASIC28.48■■■□□ 2.15
COL5A2P05997 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL5A2P05997 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC28.48■■■□□ 2.15
COL5A2P05997 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
COL5A2P05997 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC28.48■■■□□ 2.15
COL5A2P05997 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC28.48■■■□□ 2.15
COL5A2P05997 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC28.48■■■□□ 2.15
COL5A2P05997 AC128676.1-201ENST00000454392 318 ntBASIC28.48■■■□□ 2.15
COL5A2P05997 CASP6-205ENST00000505486 538 ntTSL 4 BASIC28.48■■■□□ 2.15
COL5A2P05997 MMAB-206ENST00000540016 945 ntTSL 3 BASIC28.48■■■□□ 2.15
COL5A2P05997 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
COL5A2P05997 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL5A2P05997 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL5A2P05997 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL5A2P05997 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL5A2P05997 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL5A2P05997 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL5A2P05997 AL158047.1-201ENST00000445918 881 ntBASIC28.47■■■□□ 2.15
COL5A2P05997 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
COL5A2P05997 AL162412.1-201ENST00000567129 965 ntBASIC28.47■■■□□ 2.15
COL5A2P05997 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL5A2P05997 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL5A2P05997 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL5A2P05997 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
COL5A2P05997 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
COL5A2P05997 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
COL5A2P05997 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC28.46■■■□□ 2.15
COL5A2P05997 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
COL5A2P05997 MMD2-204ENST00000612910 778 ntTSL 5 BASIC28.46■■■□□ 2.15
COL5A2P05997 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
COL5A2P05997 ANOS2P-203ENST00000472227 1816 ntBASIC28.46■■■□□ 2.15
COL5A2P05997 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC28.46■■■□□ 2.15
COL5A2P05997 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
COL5A2P05997 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
COL5A2P05997 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
COL5A2P05997 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
COL5A2P05997 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC28.45■■■□□ 2.15
COL5A2P05997 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
COL5A2P05997 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
COL5A2P05997 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
COL5A2P05997 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.45■■■□□ 2.14
COL5A2P05997 RBM17P2-201ENST00000616397 1405 ntBASIC28.45■■■□□ 2.14
COL5A2P05997 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC28.44■■■□□ 2.14
COL5A2P05997 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL5A2P05997 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL5A2P05997 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
COL5A2P05997 UNC93B5-201ENST00000530315 699 ntBASIC28.44■■■□□ 2.14
COL5A2P05997 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
COL5A2P05997 AC142381.4-202ENST00000563973 229 ntBASIC28.44■■■□□ 2.14
COL5A2P05997 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL5A2P05997 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC28.44■■■□□ 2.14
COL5A2P05997 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL5A2P05997 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
COL5A2P05997 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL5A2P05997 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC28.43■■■□□ 2.14
COL5A2P05997 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL5A2P05997 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL5A2P05997 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC28.43■■■□□ 2.14
COL5A2P05997 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC28.43■■■□□ 2.14
COL5A2P05997 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
COL5A2P05997 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL5A2P05997 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC28.43■■■□□ 2.14
COL5A2P05997 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL5A2P05997 THRA-202ENST00000394121 2260 ntTSL 2 BASIC28.43■■■□□ 2.14
COL5A2P05997 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL5A2P05997 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC28.42■■■□□ 2.14
COL5A2P05997 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC28.42■■■□□ 2.14
COL5A2P05997 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
COL5A2P05997 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC28.42■■■□□ 2.14
COL5A2P05997 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC28.42■■■□□ 2.14
COL5A2P05997 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC28.42■■■□□ 2.14
COL5A2P05997 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC28.42■■■□□ 2.14
COL5A2P05997 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
COL5A2P05997 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.42■■■□□ 2.14
COL5A2P05997 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC28.42■■■□□ 2.14
COL5A2P05997 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
COL5A2P05997 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms