Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDGFBP01127 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDGFBP01127 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDGFBP01127 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDGFBP01127 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.72■■□□□ 1.07
PDGFBP01127 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.72■■□□□ 1.07
PDGFBP01127 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.72■■□□□ 1.07
PDGFBP01127 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.72■■□□□ 1.07
PDGFBP01127 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
PDGFBP01127 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDGFBP01127 C1QBPP2-201ENST00000528754 825 ntBASIC21.72■■□□□ 1.07
PDGFBP01127 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDGFBP01127 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.72■■□□□ 1.07
PDGFBP01127 LINC01023-201ENST00000606054 436 ntBASIC21.72■■□□□ 1.07
PDGFBP01127 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDGFBP01127 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.72■■□□□ 1.07
PDGFBP01127 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDGFBP01127 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDGFBP01127 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDGFBP01127 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PDGFBP01127 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDGFBP01127 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDGFBP01127 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDGFBP01127 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDGFBP01127 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDGFBP01127 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDGFBP01127 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
PDGFBP01127 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.71■■□□□ 1.07
PDGFBP01127 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDGFBP01127 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.71■■□□□ 1.07
PDGFBP01127 AP004607.7-201ENST00000527152 1677 ntBASIC21.71■■□□□ 1.07
PDGFBP01127 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.71■■□□□ 1.07
PDGFBP01127 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.71■■□□□ 1.07
PDGFBP01127 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDGFBP01127 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.7■■□□□ 1.06
PDGFBP01127 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.7■■□□□ 1.06
PDGFBP01127 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.7■■□□□ 1.06
PDGFBP01127 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.7■■□□□ 1.06
PDGFBP01127 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDGFBP01127 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.7■■□□□ 1.06
PDGFBP01127 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDGFBP01127 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.7■■□□□ 1.06
PDGFBP01127 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PDGFBP01127 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.7■■□□□ 1.06
PDGFBP01127 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDGFBP01127 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
PDGFBP01127 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDGFBP01127 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFBP01127 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.69■■□□□ 1.06
PDGFBP01127 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PDGFBP01127 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.69■■□□□ 1.06
PDGFBP01127 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFBP01127 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFBP01127 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.69■■□□□ 1.06
PDGFBP01127 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.69■■□□□ 1.06
PDGFBP01127 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.69■■□□□ 1.06
PDGFBP01127 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PDGFBP01127 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
PDGFBP01127 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFBP01127 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
PDGFBP01127 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PDGFBP01127 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PDGFBP01127 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFBP01127 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
PDGFBP01127 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDGFBP01127 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDGFBP01127 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDGFBP01127 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.68■■□□□ 1.06
PDGFBP01127 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.68■■□□□ 1.06
PDGFBP01127 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.68■■□□□ 1.06
PDGFBP01127 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.68■■□□□ 1.06
PDGFBP01127 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.68■■□□□ 1.06
PDGFBP01127 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDGFBP01127 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
PDGFBP01127 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDGFBP01127 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
PDGFBP01127 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PDGFBP01127 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.68■■□□□ 1.06
PDGFBP01127 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDGFBP01127 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDGFBP01127 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDGFBP01127 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDGFBP01127 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDGFBP01127 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
PDGFBP01127 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.67■■□□□ 1.06
PDGFBP01127 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PDGFBP01127 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDGFBP01127 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDGFBP01127 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDGFBP01127 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.67■■□□□ 1.06
PDGFBP01127 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.67■■□□□ 1.06
PDGFBP01127 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.67■■□□□ 1.06
PDGFBP01127 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.67■■□□□ 1.06
PDGFBP01127 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.67■■□□□ 1.06
PDGFBP01127 AC053503.5-201ENST00000601508 636 ntBASIC21.67■■□□□ 1.06
PDGFBP01127 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDGFBP01127 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDGFBP01127 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.66■■□□□ 1.06
PDGFBP01127 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PDGFBP01127 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms