Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CSPG5O95196 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CSPG5O95196 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CSPG5O95196 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
CSPG5O95196 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.91■■□□□ 1.26
CSPG5O95196 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CSPG5O95196 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.91■■□□□ 1.26
CSPG5O95196 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CSPG5O95196 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CSPG5O95196 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CSPG5O95196 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.9■■□□□ 1.26
CSPG5O95196 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CSPG5O95196 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CSPG5O95196 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CSPG5O95196 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.9■■□□□ 1.26
CSPG5O95196 MKRN4P-201ENST00000444706 1521 ntBASIC22.9■■□□□ 1.26
CSPG5O95196 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
CSPG5O95196 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CSPG5O95196 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CSPG5O95196 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CSPG5O95196 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CSPG5O95196 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
CSPG5O95196 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CSPG5O95196 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CSPG5O95196 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CSPG5O95196 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.89■■□□□ 1.26
CSPG5O95196 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.89■■□□□ 1.26
CSPG5O95196 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CSPG5O95196 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
CSPG5O95196 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
CSPG5O95196 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
CSPG5O95196 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.89■■□□□ 1.25
CSPG5O95196 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.89■■□□□ 1.25
CSPG5O95196 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CSPG5O95196 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CSPG5O95196 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
CSPG5O95196 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CSPG5O95196 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
CSPG5O95196 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CSPG5O95196 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.88■■□□□ 1.25
CSPG5O95196 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CSPG5O95196 RPS2P52-201ENST00000469610 820 ntBASIC22.88■■□□□ 1.25
CSPG5O95196 AC133552.2-202ENST00000575694 574 ntBASIC22.88■■□□□ 1.25
CSPG5O95196 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
CSPG5O95196 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CSPG5O95196 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CSPG5O95196 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.88■■□□□ 1.25
CSPG5O95196 LINC01960-201ENST00000563759 1884 ntBASIC22.88■■□□□ 1.25
CSPG5O95196 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
CSPG5O95196 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CSPG5O95196 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CSPG5O95196 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CSPG5O95196 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
CSPG5O95196 PRORSD1P-201ENST00000295112 541 ntBASIC22.87■■□□□ 1.25
CSPG5O95196 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.87■■□□□ 1.25
CSPG5O95196 MIPEPP3-201ENST00000412105 444 ntBASIC22.87■■□□□ 1.25
CSPG5O95196 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.87■■□□□ 1.25
CSPG5O95196 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.87■■□□□ 1.25
CSPG5O95196 AC093787.1-201ENST00000450396 207 ntBASIC22.87■■□□□ 1.25
CSPG5O95196 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.87■■□□□ 1.25
CSPG5O95196 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.87■■□□□ 1.25
CSPG5O95196 AC016405.3-201ENST00000607710 860 ntBASIC22.87■■□□□ 1.25
CSPG5O95196 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.87■■□□□ 1.25
CSPG5O95196 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.87■■□□□ 1.25
CSPG5O95196 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CSPG5O95196 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CSPG5O95196 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
CSPG5O95196 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CSPG5O95196 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CSPG5O95196 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC22.86■■□□□ 1.25
CSPG5O95196 MIR4758-201ENST00000577688 71 ntBASIC22.86■■□□□ 1.25
CSPG5O95196 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.86■■□□□ 1.25
CSPG5O95196 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
CSPG5O95196 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CSPG5O95196 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CSPG5O95196 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CSPG5O95196 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
CSPG5O95196 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CSPG5O95196 RARRES2P4-201ENST00000514074 484 ntBASIC22.85■■□□□ 1.25
CSPG5O95196 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CSPG5O95196 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.85■■□□□ 1.25
CSPG5O95196 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CSPG5O95196 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.85■■□□□ 1.25
CSPG5O95196 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.85■■□□□ 1.25
CSPG5O95196 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CSPG5O95196 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CSPG5O95196 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.84■■□□□ 1.25
CSPG5O95196 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.84■■□□□ 1.25
CSPG5O95196 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CSPG5O95196 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CSPG5O95196 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CSPG5O95196 SLC7A5P1-201ENST00000568957 537 ntBASIC22.84■■□□□ 1.25
CSPG5O95196 AC138907.5-202ENST00000569484 235 ntBASIC22.84■■□□□ 1.25
CSPG5O95196 ITM2C-210ENST00000620962 501 ntBASIC22.84■■□□□ 1.25
CSPG5O95196 AC013268.1-206ENST00000638368 961 ntBASIC22.84■■□□□ 1.25
CSPG5O95196 AC112229.1-201ENST00000639295 961 ntBASIC22.84■■□□□ 1.25
CSPG5O95196 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
CSPG5O95196 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.84■■□□□ 1.25
CSPG5O95196 AC068338.2-201ENST00000563278 1430 ntBASIC22.83■■□□□ 1.25
CSPG5O95196 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms