Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.41■■□□□ 1.34
UBE4BO95155 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.4■■□□□ 1.34
UBE4BO95155 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.4■■□□□ 1.34
UBE4BO95155 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
UBE4BO95155 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
UBE4BO95155 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
UBE4BO95155 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
UBE4BO95155 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
UBE4BO95155 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.4■■□□□ 1.34
UBE4BO95155 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.4■■□□□ 1.34
UBE4BO95155 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
UBE4BO95155 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
UBE4BO95155 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
UBE4BO95155 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
UBE4BO95155 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
UBE4BO95155 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.39■■□□□ 1.34
UBE4BO95155 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.39■■□□□ 1.34
UBE4BO95155 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.34
UBE4BO95155 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.39■■□□□ 1.34
UBE4BO95155 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.39■■□□□ 1.34
UBE4BO95155 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.39■■□□□ 1.34
UBE4BO95155 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.39■■□□□ 1.33
UBE4BO95155 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
UBE4BO95155 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
UBE4BO95155 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.39■■□□□ 1.33
UBE4BO95155 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
UBE4BO95155 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
UBE4BO95155 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.38■■□□□ 1.33
UBE4BO95155 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
UBE4BO95155 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
UBE4BO95155 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
UBE4BO95155 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.38■■□□□ 1.33
UBE4BO95155 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
UBE4BO95155 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
UBE4BO95155 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.38■■□□□ 1.33
UBE4BO95155 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
UBE4BO95155 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
UBE4BO95155 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
UBE4BO95155 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
UBE4BO95155 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
UBE4BO95155 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
UBE4BO95155 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
UBE4BO95155 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.37■■□□□ 1.33
UBE4BO95155 ZNRF2P3-201ENST00000424200 374 ntBASIC23.37■■□□□ 1.33
UBE4BO95155 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.37■■□□□ 1.33
UBE4BO95155 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.37■■□□□ 1.33
UBE4BO95155 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.37■■□□□ 1.33
UBE4BO95155 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
UBE4BO95155 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
UBE4BO95155 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.37■■□□□ 1.33
UBE4BO95155 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.37■■□□□ 1.33
UBE4BO95155 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
UBE4BO95155 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
UBE4BO95155 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
UBE4BO95155 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
UBE4BO95155 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
UBE4BO95155 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
UBE4BO95155 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
UBE4BO95155 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
UBE4BO95155 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.36■■□□□ 1.33
UBE4BO95155 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
UBE4BO95155 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.36■■□□□ 1.33
UBE4BO95155 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.36■■□□□ 1.33
UBE4BO95155 AC019069.1-201ENST00000610008 1333 ntBASIC23.36■■□□□ 1.33
UBE4BO95155 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
UBE4BO95155 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
UBE4BO95155 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.36■■□□□ 1.33
UBE4BO95155 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
UBE4BO95155 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
UBE4BO95155 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
UBE4BO95155 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.35■■□□□ 1.33
UBE4BO95155 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
UBE4BO95155 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.35■■□□□ 1.33
UBE4BO95155 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
UBE4BO95155 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
UBE4BO95155 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
UBE4BO95155 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
UBE4BO95155 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.35■■□□□ 1.33
UBE4BO95155 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
UBE4BO95155 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
UBE4BO95155 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
UBE4BO95155 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.35■■□□□ 1.33
UBE4BO95155 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.34■■□□□ 1.33
UBE4BO95155 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.34■■□□□ 1.33
UBE4BO95155 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
UBE4BO95155 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
UBE4BO95155 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
UBE4BO95155 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.34■■□□□ 1.33
UBE4BO95155 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.34■■□□□ 1.33
UBE4BO95155 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.34■■□□□ 1.33
UBE4BO95155 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.34■■□□□ 1.33
UBE4BO95155 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.34■■□□□ 1.33
UBE4BO95155 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
UBE4BO95155 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
UBE4BO95155 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
UBE4BO95155 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.34■■□□□ 1.33
UBE4BO95155 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
UBE4BO95155 AC123595.1-201ENST00000440769 1046 ntBASIC23.33■■□□□ 1.33
UBE4BO95155 YBX1P1-201ENST00000445822 960 ntBASIC23.33■■□□□ 1.33
UBE4BO95155 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms