Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP1O94782 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
USP1O94782 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
USP1O94782 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.54■■□□□ 1.04
USP1O94782 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
USP1O94782 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
USP1O94782 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
USP1O94782 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.54■■□□□ 1.04
USP1O94782 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP1O94782 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP1O94782 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP1O94782 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.54■■□□□ 1.04
USP1O94782 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP1O94782 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.54■■□□□ 1.04
USP1O94782 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.54■■□□□ 1.04
USP1O94782 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
USP1O94782 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.54■■□□□ 1.04
USP1O94782 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
USP1O94782 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP1O94782 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP1O94782 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
USP1O94782 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP1O94782 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP1O94782 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP1O94782 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
USP1O94782 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
USP1O94782 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP1O94782 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.53■■□□□ 1.04
USP1O94782 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
USP1O94782 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP1O94782 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
USP1O94782 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.53■■□□□ 1.04
USP1O94782 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.52■■□□□ 1.04
USP1O94782 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP1O94782 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
USP1O94782 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.52■■□□□ 1.04
USP1O94782 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
USP1O94782 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
USP1O94782 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.52■■□□□ 1.04
USP1O94782 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
USP1O94782 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP1O94782 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP1O94782 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP1O94782 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.52■■□□□ 1.04
USP1O94782 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
USP1O94782 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
USP1O94782 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
USP1O94782 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.52■■□□□ 1.03
USP1O94782 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
USP1O94782 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
USP1O94782 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
USP1O94782 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
USP1O94782 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
USP1O94782 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
USP1O94782 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
USP1O94782 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
USP1O94782 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.51■■□□□ 1.03
USP1O94782 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.51■■□□□ 1.03
USP1O94782 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
USP1O94782 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
USP1O94782 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP1O94782 AP004607.7-201ENST00000527152 1677 ntBASIC21.5■■□□□ 1.03
USP1O94782 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
USP1O94782 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP1O94782 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP1O94782 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.5■■□□□ 1.03
USP1O94782 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP1O94782 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.5■■□□□ 1.03
USP1O94782 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
USP1O94782 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP1O94782 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
USP1O94782 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.5■■□□□ 1.03
USP1O94782 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.5■■□□□ 1.03
USP1O94782 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.5■■□□□ 1.03
USP1O94782 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP1O94782 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP1O94782 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP1O94782 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
USP1O94782 UNC93B3-201ENST00000308076 687 ntBASIC21.49■■□□□ 1.03
USP1O94782 BX842568.3-201ENST00000418104 571 ntBASIC21.49■■□□□ 1.03
USP1O94782 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
USP1O94782 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
USP1O94782 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
USP1O94782 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP1O94782 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.49■■□□□ 1.03
USP1O94782 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP1O94782 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP1O94782 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP1O94782 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
USP1O94782 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
USP1O94782 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP1O94782 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
USP1O94782 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP1O94782 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP1O94782 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
USP1O94782 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.48■■□□□ 1.03
USP1O94782 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.48■■□□□ 1.03
USP1O94782 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
USP1O94782 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
USP1O94782 MIR4767-201ENST00000582827 78 ntBASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms