Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCMT2O60294 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LCMT2O60294 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCMT2O60294 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCMT2O60294 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LCMT2O60294 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCMT2O60294 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LCMT2O60294 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCMT2O60294 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCMT2O60294 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LCMT2O60294 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LCMT2O60294 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.44■□□□□ 0.86
LCMT2O60294 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LCMT2O60294 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
LCMT2O60294 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LCMT2O60294 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LCMT2O60294 FBXW4P1-201ENST00000426721 2239 ntBASIC20.44■□□□□ 0.86
LCMT2O60294 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LCMT2O60294 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
LCMT2O60294 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
LCMT2O60294 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LCMT2O60294 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LCMT2O60294 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.44■□□□□ 0.86
LCMT2O60294 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.44■□□□□ 0.86
LCMT2O60294 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.44■□□□□ 0.86
LCMT2O60294 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.44■□□□□ 0.86
LCMT2O60294 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LCMT2O60294 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
LCMT2O60294 LINC02228-203ENST00000641970 1355 ntBASIC20.44■□□□□ 0.86
LCMT2O60294 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.44■□□□□ 0.86
LCMT2O60294 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LCMT2O60294 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LCMT2O60294 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.43■□□□□ 0.86
LCMT2O60294 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LCMT2O60294 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LCMT2O60294 AC026271.2-201ENST00000428091 497 ntBASIC20.43■□□□□ 0.86
LCMT2O60294 AC097381.1-201ENST00000429019 1296 ntBASIC20.43■□□□□ 0.86
LCMT2O60294 CCDC92B-201ENST00000575506 885 ntBASIC20.43■□□□□ 0.86
LCMT2O60294 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.43■□□□□ 0.86
LCMT2O60294 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LCMT2O60294 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LCMT2O60294 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
LCMT2O60294 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
LCMT2O60294 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LCMT2O60294 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LCMT2O60294 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
LCMT2O60294 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
LCMT2O60294 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LCMT2O60294 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LCMT2O60294 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LCMT2O60294 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LCMT2O60294 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LCMT2O60294 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.42■□□□□ 0.86
LCMT2O60294 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
LCMT2O60294 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.42■□□□□ 0.86
LCMT2O60294 TERF1P2-201ENST00000583350 1212 ntBASIC20.42■□□□□ 0.86
LCMT2O60294 MIR6821-201ENST00000617625 74 ntBASIC20.42■□□□□ 0.86
LCMT2O60294 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.42■□□□□ 0.86
LCMT2O60294 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.42■□□□□ 0.86
LCMT2O60294 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LCMT2O60294 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LCMT2O60294 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.42■□□□□ 0.86
LCMT2O60294 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LCMT2O60294 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LCMT2O60294 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LCMT2O60294 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LCMT2O60294 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LCMT2O60294 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LCMT2O60294 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LCMT2O60294 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LCMT2O60294 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
LCMT2O60294 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.41■□□□□ 0.86
LCMT2O60294 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.41■□□□□ 0.86
LCMT2O60294 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.41■□□□□ 0.86
LCMT2O60294 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.41■□□□□ 0.86
LCMT2O60294 RARRES2P6-201ENST00000567333 442 ntBASIC20.41■□□□□ 0.86
LCMT2O60294 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.41■□□□□ 0.86
LCMT2O60294 AC087623.3-201ENST00000607047 1098 ntBASIC20.41■□□□□ 0.86
LCMT2O60294 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.41■□□□□ 0.86
LCMT2O60294 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LCMT2O60294 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.41■□□□□ 0.86
LCMT2O60294 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.41■□□□□ 0.86
LCMT2O60294 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
LCMT2O60294 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LCMT2O60294 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LCMT2O60294 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LCMT2O60294 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LCMT2O60294 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LCMT2O60294 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LCMT2O60294 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LCMT2O60294 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.4■□□□□ 0.86
LCMT2O60294 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LCMT2O60294 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.4■□□□□ 0.86
LCMT2O60294 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LCMT2O60294 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.4■□□□□ 0.86
LCMT2O60294 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
LCMT2O60294 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LCMT2O60294 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.39■□□□□ 0.86
LCMT2O60294 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
LCMT2O60294 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms