Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH7O60245 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PCDH7O60245 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH7O60245 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH7O60245 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH7O60245 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PCDH7O60245 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH7O60245 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH7O60245 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDH7O60245 AC099791.1-201ENST00000416440 715 ntBASIC20.37■□□□□ 0.85
PCDH7O60245 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
PCDH7O60245 AC027682.1-201ENST00000562846 899 ntBASIC20.37■□□□□ 0.85
PCDH7O60245 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.37■□□□□ 0.85
PCDH7O60245 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDH7O60245 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDH7O60245 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PCDH7O60245 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH7O60245 Z98882.1-201ENST00000622160 2253 ntBASIC20.37■□□□□ 0.85
PCDH7O60245 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDH7O60245 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH7O60245 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PCDH7O60245 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH7O60245 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCDH7O60245 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH7O60245 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH7O60245 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH7O60245 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDH7O60245 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH7O60245 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDH7O60245 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH7O60245 SMUG1P1-201ENST00000590640 811 ntBASIC20.36■□□□□ 0.85
PCDH7O60245 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH7O60245 AC110285.6-201ENST00000617652 491 ntBASIC20.36■□□□□ 0.85
PCDH7O60245 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH7O60245 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PCDH7O60245 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH7O60245 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH7O60245 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH7O60245 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDH7O60245 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDH7O60245 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH7O60245 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH7O60245 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDH7O60245 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDH7O60245 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH7O60245 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.35■□□□□ 0.85
PCDH7O60245 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH7O60245 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDH7O60245 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH7O60245 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH7O60245 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH7O60245 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PCDH7O60245 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH7O60245 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PCDH7O60245 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH7O60245 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDH7O60245 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDH7O60245 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH7O60245 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH7O60245 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH7O60245 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH7O60245 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH7O60245 EDA-201ENST00000338901 1233 ntBASIC20.34■□□□□ 0.85
PCDH7O60245 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDH7O60245 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDH7O60245 AP001330.3-201ENST00000520123 633 ntBASIC20.34■□□□□ 0.85
PCDH7O60245 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDH7O60245 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH7O60245 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH7O60245 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH7O60245 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDH7O60245 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH7O60245 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH7O60245 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDH7O60245 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDH7O60245 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH7O60245 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH7O60245 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH7O60245 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH7O60245 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDH7O60245 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDH7O60245 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.33■□□□□ 0.85
PCDH7O60245 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PCDH7O60245 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDH7O60245 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
PCDH7O60245 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDH7O60245 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
PCDH7O60245 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH7O60245 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDH7O60245 TSPY26P-201ENST00000476365 1326 ntBASIC20.32■□□□□ 0.84
PCDH7O60245 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PCDH7O60245 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PCDH7O60245 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH7O60245 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH7O60245 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH7O60245 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDH7O60245 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDH7O60245 AL355001.2-201ENST00000620617 1191 ntBASIC20.32■□□□□ 0.84
PCDH7O60245 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PCDH7O60245 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms