Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXS1O43638 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
FOXS1O43638 AL117328.2-201ENST00000624617 1940 ntBASIC20.17■□□□□ 0.82
FOXS1O43638 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
FOXS1O43638 FAM99A-202ENST00000538190 1989 ntBASIC20.17■□□□□ 0.82
FOXS1O43638 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXS1O43638 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
FOXS1O43638 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXS1O43638 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXS1O43638 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
FOXS1O43638 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.17■□□□□ 0.82
FOXS1O43638 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXS1O43638 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXS1O43638 KRT19P1-201ENST00000405746 1186 ntBASIC20.17■□□□□ 0.82
FOXS1O43638 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.17■□□□□ 0.82
FOXS1O43638 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
FOXS1O43638 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXS1O43638 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXS1O43638 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXS1O43638 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXS1O43638 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXS1O43638 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXS1O43638 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXS1O43638 AC003102.1-202ENST00000563394 1796 ntBASIC20.16■□□□□ 0.82
FOXS1O43638 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXS1O43638 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXS1O43638 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXS1O43638 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXS1O43638 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXS1O43638 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.16■□□□□ 0.82
FOXS1O43638 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXS1O43638 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXS1O43638 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.16■□□□□ 0.82
FOXS1O43638 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXS1O43638 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
FOXS1O43638 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXS1O43638 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXS1O43638 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXS1O43638 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXS1O43638 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXS1O43638 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.15■□□□□ 0.82
FOXS1O43638 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXS1O43638 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXS1O43638 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXS1O43638 EEF1DP3-203ENST00000566025 782 ntBASIC20.15■□□□□ 0.82
FOXS1O43638 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXS1O43638 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXS1O43638 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXS1O43638 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXS1O43638 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXS1O43638 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXS1O43638 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
FOXS1O43638 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXS1O43638 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXS1O43638 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXS1O43638 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXS1O43638 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXS1O43638 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXS1O43638 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXS1O43638 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
FOXS1O43638 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXS1O43638 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXS1O43638 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXS1O43638 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXS1O43638 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.14■□□□□ 0.81
FOXS1O43638 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.14■□□□□ 0.81
FOXS1O43638 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.14■□□□□ 0.81
FOXS1O43638 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.14■□□□□ 0.81
FOXS1O43638 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
FOXS1O43638 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXS1O43638 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
FOXS1O43638 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FOXS1O43638 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXS1O43638 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXS1O43638 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FOXS1O43638 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXS1O43638 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
FOXS1O43638 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.13■□□□□ 0.81
FOXS1O43638 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.13■□□□□ 0.81
FOXS1O43638 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FOXS1O43638 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.13■□□□□ 0.81
FOXS1O43638 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.13■□□□□ 0.81
FOXS1O43638 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.13■□□□□ 0.81
FOXS1O43638 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.13■□□□□ 0.81
FOXS1O43638 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.13■□□□□ 0.81
FOXS1O43638 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXS1O43638 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXS1O43638 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXS1O43638 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXS1O43638 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXS1O43638 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXS1O43638 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FOXS1O43638 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXS1O43638 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FOXS1O43638 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXS1O43638 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.12■□□□□ 0.81
FOXS1O43638 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXS1O43638 AC053503.5-201ENST00000601508 636 ntBASIC20.12■□□□□ 0.81
FOXS1O43638 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXS1O43638 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms