Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RRP8O43159 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RRP8O43159 AL353803.4-201ENST00000565882 1934 ntBASIC20.12■□□□□ 0.81
RRP8O43159 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RRP8O43159 MIR1224-201ENST00000408193 85 ntBASIC20.11■□□□□ 0.81
RRP8O43159 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.11■□□□□ 0.81
RRP8O43159 AC026366.1-201ENST00000488803 879 ntBASIC20.11■□□□□ 0.81
RRP8O43159 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.11■□□□□ 0.81
RRP8O43159 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.11■□□□□ 0.81
RRP8O43159 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.11■□□□□ 0.81
RRP8O43159 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.11■□□□□ 0.81
RRP8O43159 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.11■□□□□ 0.81
RRP8O43159 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.11■□□□□ 0.81
RRP8O43159 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.11■□□□□ 0.81
RRP8O43159 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RRP8O43159 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.1■□□□□ 0.81
RRP8O43159 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.1■□□□□ 0.81
RRP8O43159 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.1■□□□□ 0.81
RRP8O43159 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RRP8O43159 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RRP8O43159 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.1■□□□□ 0.81
RRP8O43159 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RRP8O43159 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.1■□□□□ 0.81
RRP8O43159 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RRP8O43159 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.1■□□□□ 0.81
RRP8O43159 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.1■□□□□ 0.81
RRP8O43159 AC091874.3-201ENST00000512672 1195 ntBASIC20.1■□□□□ 0.81
RRP8O43159 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.1■□□□□ 0.81
RRP8O43159 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.1■□□□□ 0.81
RRP8O43159 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RRP8O43159 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RRP8O43159 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.1■□□□□ 0.81
RRP8O43159 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RRP8O43159 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RRP8O43159 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RRP8O43159 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RRP8O43159 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.09■□□□□ 0.81
RRP8O43159 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RRP8O43159 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.09■□□□□ 0.81
RRP8O43159 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RRP8O43159 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RRP8O43159 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RRP8O43159 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RRP8O43159 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RRP8O43159 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RRP8O43159 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RRP8O43159 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.09■□□□□ 0.81
RRP8O43159 AC120498.10-201ENST00000621827 505 ntBASIC20.09■□□□□ 0.81
RRP8O43159 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RRP8O43159 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RRP8O43159 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RRP8O43159 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
RRP8O43159 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RRP8O43159 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RRP8O43159 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.08■□□□□ 0.81
RRP8O43159 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RRP8O43159 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RRP8O43159 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.08■□□□□ 0.81
RRP8O43159 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RRP8O43159 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RRP8O43159 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RRP8O43159 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
RRP8O43159 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RRP8O43159 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.08■□□□□ 0.81
RRP8O43159 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.08■□□□□ 0.81
RRP8O43159 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RRP8O43159 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.08■□□□□ 0.81
RRP8O43159 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RRP8O43159 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RRP8O43159 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RRP8O43159 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RRP8O43159 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.07■□□□□ 0.8
RRP8O43159 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RRP8O43159 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RRP8O43159 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RRP8O43159 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.07■□□□□ 0.8
RRP8O43159 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.07■□□□□ 0.8
RRP8O43159 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.07■□□□□ 0.8
RRP8O43159 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RRP8O43159 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RRP8O43159 AC073648.6-201ENST00000641589 218 ntBASIC20.07■□□□□ 0.8
RRP8O43159 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.07■□□□□ 0.8
RRP8O43159 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RRP8O43159 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RRP8O43159 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RRP8O43159 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RRP8O43159 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.06■□□□□ 0.8
RRP8O43159 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RRP8O43159 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RRP8O43159 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RRP8O43159 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RRP8O43159 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RRP8O43159 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RRP8O43159 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.06■□□□□ 0.8
RRP8O43159 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.06■□□□□ 0.8
RRP8O43159 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RRP8O43159 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
RRP8O43159 AP003097.1-201ENST00000530657 1135 ntBASIC20.06■□□□□ 0.8
RRP8O43159 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.06■□□□□ 0.8
RRP8O43159 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms