Protein–RNA interactions for Protein: O15446

CD3EAP, DNA-directed RNA polymerase I subunit RPA34, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3EAPO15446 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CD3EAPO15446 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CD3EAPO15446 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CD3EAPO15446 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CD3EAPO15446 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CD3EAPO15446 AC104564.3-201ENST00000582367 638 ntBASIC21.3■■□□□ 1
CD3EAPO15446 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CD3EAPO15446 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CD3EAPO15446 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CD3EAPO15446 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CD3EAPO15446 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.29■■□□□ 1
CD3EAPO15446 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CD3EAPO15446 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.29■■□□□ 1
CD3EAPO15446 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
CD3EAPO15446 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.29■■□□□ 1
CD3EAPO15446 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CD3EAPO15446 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.29■■□□□ 1
CD3EAPO15446 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.29■■□□□ 1
CD3EAPO15446 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.29■■□□□ 1
CD3EAPO15446 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.29■■□□□ 1
CD3EAPO15446 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.29■■□□□ 1
CD3EAPO15446 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.29■■□□□ 1
CD3EAPO15446 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.29■■□□□ 1
CD3EAPO15446 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CD3EAPO15446 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.29■■□□□ 1
CD3EAPO15446 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.29■■□□□ 1
CD3EAPO15446 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.29■■□□□ 1
CD3EAPO15446 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CD3EAPO15446 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.28■■□□□ 1
CD3EAPO15446 MIR572-201ENST00000384983 95 ntBASIC21.28■■□□□ 1
CD3EAPO15446 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.28■■□□□ 1
CD3EAPO15446 AC142381.2-201ENST00000566120 298 ntBASIC21.28■■□□□ 1
CD3EAPO15446 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.28■■□□□ 1
CD3EAPO15446 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.28■■□□□ 1
CD3EAPO15446 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CD3EAPO15446 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.28■■□□□ 1
CD3EAPO15446 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.28■■□□□ 1
CD3EAPO15446 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CD3EAPO15446 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CD3EAPO15446 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.27■■□□□ 1
CD3EAPO15446 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD3EAPO15446 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.27■■□□□ 1
CD3EAPO15446 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.27■■□□□ 1
CD3EAPO15446 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.27■■□□□ 1
CD3EAPO15446 AC005837.3-201ENST00000612163 286 ntBASIC21.27■■□□□ 1
CD3EAPO15446 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.27■■□□□ 1
CD3EAPO15446 AP006587.3-201ENST00000525742 1516 ntBASIC21.27■■□□□ 1
CD3EAPO15446 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD3EAPO15446 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.27■■□□□ 1
CD3EAPO15446 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CD3EAPO15446 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
CD3EAPO15446 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CD3EAPO15446 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.27■□□□□ 0.99
CD3EAPO15446 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD3EAPO15446 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD3EAPO15446 AC003102.1-202ENST00000563394 1796 ntBASIC21.26■□□□□ 0.99
CD3EAPO15446 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CD3EAPO15446 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.26■□□□□ 0.99
CD3EAPO15446 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.26■□□□□ 0.99
CD3EAPO15446 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD3EAPO15446 AC026310.3-201ENST00000625186 2373 ntBASIC21.26■□□□□ 0.99
CD3EAPO15446 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.26■□□□□ 0.99
CD3EAPO15446 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD3EAPO15446 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.26■□□□□ 0.99
CD3EAPO15446 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD3EAPO15446 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CD3EAPO15446 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD3EAPO15446 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD3EAPO15446 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD3EAPO15446 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD3EAPO15446 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD3EAPO15446 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD3EAPO15446 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.25■□□□□ 0.99
CD3EAPO15446 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD3EAPO15446 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CD3EAPO15446 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.25■□□□□ 0.99
CD3EAPO15446 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CD3EAPO15446 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD3EAPO15446 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD3EAPO15446 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.24■□□□□ 0.99
CD3EAPO15446 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD3EAPO15446 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CD3EAPO15446 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.24■□□□□ 0.99
CD3EAPO15446 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.24■□□□□ 0.99
CD3EAPO15446 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.24■□□□□ 0.99
CD3EAPO15446 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD3EAPO15446 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD3EAPO15446 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD3EAPO15446 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD3EAPO15446 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD3EAPO15446 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.24■□□□□ 0.99
CD3EAPO15446 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD3EAPO15446 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD3EAPO15446 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD3EAPO15446 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD3EAPO15446 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.23■□□□□ 0.99
CD3EAPO15446 AC009237.3-201ENST00000393279 1427 ntBASIC21.23■□□□□ 0.99
CD3EAPO15446 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CD3EAPO15446 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.23■□□□□ 0.99
CD3EAPO15446 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms