Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TNRC18O15417 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.72■■□□□ 1.39
TNRC18O15417 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TNRC18O15417 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TNRC18O15417 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TNRC18O15417 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.71■■□□□ 1.39
TNRC18O15417 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
TNRC18O15417 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.71■■□□□ 1.39
TNRC18O15417 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC23.71■■□□□ 1.39
TNRC18O15417 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.71■■□□□ 1.39
TNRC18O15417 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.71■■□□□ 1.39
TNRC18O15417 KRT126P-201ENST00000549467 1181 ntBASIC23.71■■□□□ 1.39
TNRC18O15417 AL162412.1-201ENST00000567129 965 ntBASIC23.71■■□□□ 1.39
TNRC18O15417 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
TNRC18O15417 LINC01529-204ENST00000636474 1715 ntBASIC23.71■■□□□ 1.39
TNRC18O15417 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TNRC18O15417 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
TNRC18O15417 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TNRC18O15417 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
TNRC18O15417 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TNRC18O15417 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC23.7■■□□□ 1.39
TNRC18O15417 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
TNRC18O15417 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
TNRC18O15417 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TNRC18O15417 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TNRC18O15417 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TNRC18O15417 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TNRC18O15417 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC23.7■■□□□ 1.38
TNRC18O15417 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.7■■□□□ 1.38
TNRC18O15417 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.7■■□□□ 1.38
TNRC18O15417 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC23.7■■□□□ 1.38
TNRC18O15417 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TNRC18O15417 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.7■■□□□ 1.38
TNRC18O15417 SOX15-203ENST00000570788 1093 ntBASIC23.7■■□□□ 1.38
TNRC18O15417 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.7■■□□□ 1.38
TNRC18O15417 HLA-B-256ENST00000639848 1089 ntBASIC23.7■■□□□ 1.38
TNRC18O15417 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
TNRC18O15417 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TNRC18O15417 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.7■■□□□ 1.38
TNRC18O15417 AC004687.1-201ENST00000579003 1625 ntBASIC23.69■■□□□ 1.38
TNRC18O15417 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
TNRC18O15417 CRYGFP-201ENST00000418459 633 ntBASIC23.69■■□□□ 1.38
TNRC18O15417 DUSP5P1-201ENST00000441325 1139 ntBASIC23.69■■□□□ 1.38
TNRC18O15417 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.69■■□□□ 1.38
TNRC18O15417 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TNRC18O15417 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TNRC18O15417 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.69■■□□□ 1.38
TNRC18O15417 KRT18P57-201ENST00000443599 1254 ntBASIC23.69■■□□□ 1.38
TNRC18O15417 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
TNRC18O15417 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TNRC18O15417 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC23.69■■□□□ 1.38
TNRC18O15417 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TNRC18O15417 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TNRC18O15417 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.69■■□□□ 1.38
TNRC18O15417 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.68■■□□□ 1.38
TNRC18O15417 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.68■■□□□ 1.38
TNRC18O15417 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TNRC18O15417 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TNRC18O15417 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
TNRC18O15417 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TNRC18O15417 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TNRC18O15417 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TNRC18O15417 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TNRC18O15417 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TNRC18O15417 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TNRC18O15417 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TNRC18O15417 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TNRC18O15417 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.68■■□□□ 1.38
TNRC18O15417 AP001412.1-201ENST00000608405 714 ntBASIC23.68■■□□□ 1.38
TNRC18O15417 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.68■■□□□ 1.38
TNRC18O15417 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC23.67■■□□□ 1.38
TNRC18O15417 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.67■■□□□ 1.38
TNRC18O15417 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
TNRC18O15417 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TNRC18O15417 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TNRC18O15417 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.67■■□□□ 1.38
TNRC18O15417 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC23.67■■□□□ 1.38
TNRC18O15417 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.67■■□□□ 1.38
TNRC18O15417 CFL2-205ENST00000555765 632 ntTSL 2 BASIC23.67■■□□□ 1.38
TNRC18O15417 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC23.67■■□□□ 1.38
TNRC18O15417 AC068587.7-201ENST00000641602 218 ntBASIC23.67■■□□□ 1.38
TNRC18O15417 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TNRC18O15417 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.66■■□□□ 1.38
TNRC18O15417 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC23.66■■□□□ 1.38
TNRC18O15417 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TNRC18O15417 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TNRC18O15417 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC23.66■■□□□ 1.38
TNRC18O15417 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
TNRC18O15417 KRT17P1-201ENST00000399211 1546 ntBASIC23.66■■□□□ 1.38
TNRC18O15417 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.65■■□□□ 1.38
TNRC18O15417 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.65■■□□□ 1.38
TNRC18O15417 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.65■■□□□ 1.38
TNRC18O15417 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TNRC18O15417 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.65■■□□□ 1.38
TNRC18O15417 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
TNRC18O15417 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.65■■□□□ 1.38
TNRC18O15417 AC113347.1-201ENST00000413321 391 ntBASIC23.65■■□□□ 1.38
TNRC18O15417 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TNRC18O15417 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TNRC18O15417 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms