Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
COPEO14579 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.29■■□□□ 1
COPEO14579 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.29■■□□□ 1
COPEO14579 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COPEO14579 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
COPEO14579 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.29■■□□□ 1
COPEO14579 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.29■■□□□ 1
COPEO14579 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
COPEO14579 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.29■■□□□ 1
COPEO14579 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COPEO14579 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.28■■□□□ 1
COPEO14579 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COPEO14579 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.28■■□□□ 1
COPEO14579 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.28■■□□□ 1
COPEO14579 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.28■■□□□ 1
COPEO14579 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COPEO14579 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
COPEO14579 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COPEO14579 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.28■■□□□ 1
COPEO14579 AC239859.2-201ENST00000444165 318 ntBASIC21.28■■□□□ 1
COPEO14579 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COPEO14579 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.28■■□□□ 1
COPEO14579 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.28■■□□□ 1
COPEO14579 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.28■■□□□ 1
COPEO14579 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COPEO14579 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
COPEO14579 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
COPEO14579 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COPEO14579 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
COPEO14579 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
COPEO14579 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.27■■□□□ 1
COPEO14579 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
COPEO14579 pRNA.6-201ENST00000610482 90 ntBASIC21.27■■□□□ 1
COPEO14579 pRNA.5-201ENST00000612139 90 ntBASIC21.27■■□□□ 1
COPEO14579 pRNA.11-201ENST00000618423 90 ntBASIC21.27■■□□□ 1
COPEO14579 pRNA.13-201ENST00000619112 90 ntBASIC21.27■■□□□ 1
COPEO14579 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.27■■□□□ 1
COPEO14579 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
COPEO14579 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COPEO14579 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COPEO14579 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
COPEO14579 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
COPEO14579 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COPEO14579 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.26■□□□□ 0.99
COPEO14579 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.26■□□□□ 0.99
COPEO14579 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COPEO14579 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
COPEO14579 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COPEO14579 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
COPEO14579 OXCT2P1-201ENST00000447263 1535 ntBASIC21.26■□□□□ 0.99
COPEO14579 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
COPEO14579 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COPEO14579 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COPEO14579 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COPEO14579 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
COPEO14579 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COPEO14579 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.26■□□□□ 0.99
COPEO14579 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COPEO14579 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COPEO14579 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COPEO14579 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COPEO14579 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
COPEO14579 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
COPEO14579 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COPEO14579 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
COPEO14579 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
COPEO14579 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.25■□□□□ 0.99
COPEO14579 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COPEO14579 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
COPEO14579 AC068587.7-201ENST00000641602 218 ntBASIC21.25■□□□□ 0.99
COPEO14579 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
COPEO14579 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COPEO14579 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
COPEO14579 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.25■□□□□ 0.99
COPEO14579 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.25■□□□□ 0.99
COPEO14579 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
COPEO14579 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.24■□□□□ 0.99
COPEO14579 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COPEO14579 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COPEO14579 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COPEO14579 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COPEO14579 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COPEO14579 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COPEO14579 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.24■□□□□ 0.99
COPEO14579 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COPEO14579 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
COPEO14579 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
COPEO14579 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
COPEO14579 AC006455.2-201ENST00000429931 906 ntBASIC21.24■□□□□ 0.99
COPEO14579 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.24■□□□□ 0.99
COPEO14579 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COPEO14579 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.24■□□□□ 0.99
COPEO14579 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.24■□□□□ 0.99
COPEO14579 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
COPEO14579 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COPEO14579 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COPEO14579 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.24■□□□□ 0.99
COPEO14579 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COPEO14579 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
COPEO14579 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms