Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN5O00501 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN5O00501 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.59■■□□□ 1.21
CLDN5O00501 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.59■■□□□ 1.21
CLDN5O00501 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN5O00501 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN5O00501 FAM99A-202ENST00000538190 1989 ntBASIC22.59■■□□□ 1.21
CLDN5O00501 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN5O00501 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN5O00501 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CLDN5O00501 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN5O00501 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN5O00501 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.58■■□□□ 1.21
CLDN5O00501 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.58■■□□□ 1.21
CLDN5O00501 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.58■■□□□ 1.21
CLDN5O00501 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
CLDN5O00501 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CLDN5O00501 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CLDN5O00501 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CLDN5O00501 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CLDN5O00501 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.58■■□□□ 1.21
CLDN5O00501 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CLDN5O00501 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.58■■□□□ 1.21
CLDN5O00501 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.58■■□□□ 1.21
CLDN5O00501 AC012676.1-201ENST00000574705 1949 ntBASIC22.58■■□□□ 1.21
CLDN5O00501 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.58■■□□□ 1.21
CLDN5O00501 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CLDN5O00501 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CLDN5O00501 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.58■■□□□ 1.2
CLDN5O00501 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.57■■□□□ 1.2
CLDN5O00501 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN5O00501 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN5O00501 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.57■■□□□ 1.2
CLDN5O00501 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.57■■□□□ 1.2
CLDN5O00501 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
CLDN5O00501 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CLDN5O00501 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN5O00501 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN5O00501 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN5O00501 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
CLDN5O00501 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.57■■□□□ 1.2
CLDN5O00501 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.57■■□□□ 1.2
CLDN5O00501 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN5O00501 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN5O00501 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN5O00501 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.56■■□□□ 1.2
CLDN5O00501 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.56■■□□□ 1.2
CLDN5O00501 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.56■■□□□ 1.2
CLDN5O00501 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.56■■□□□ 1.2
CLDN5O00501 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN5O00501 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN5O00501 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN5O00501 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN5O00501 AC003102.1-202ENST00000563394 1796 ntBASIC22.55■■□□□ 1.2
CLDN5O00501 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLDN5O00501 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLDN5O00501 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.55■■□□□ 1.2
CLDN5O00501 ECEL1P1-201ENST00000373592 1742 ntBASIC22.55■■□□□ 1.2
CLDN5O00501 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLDN5O00501 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLDN5O00501 KRT19P1-201ENST00000405746 1186 ntBASIC22.55■■□□□ 1.2
CLDN5O00501 AC004911.1-201ENST00000416316 871 ntBASIC22.55■■□□□ 1.2
CLDN5O00501 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.55■■□□□ 1.2
CLDN5O00501 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.55■■□□□ 1.2
CLDN5O00501 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.55■■□□□ 1.2
CLDN5O00501 AC137761.2-201ENST00000561729 223 ntBASIC22.55■■□□□ 1.2
CLDN5O00501 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.55■■□□□ 1.2
CLDN5O00501 AC145350.3-201ENST00000569033 163 ntBASIC22.55■■□□□ 1.2
CLDN5O00501 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLDN5O00501 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.55■■□□□ 1.2
CLDN5O00501 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CLDN5O00501 AC010542.4-201ENST00000563151 1910 ntBASIC22.55■■□□□ 1.2
CLDN5O00501 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLDN5O00501 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLDN5O00501 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLDN5O00501 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.54■■□□□ 1.2
CLDN5O00501 AL137784.2-201ENST00000607332 1000 ntBASIC22.54■■□□□ 1.2
CLDN5O00501 AL117328.2-201ENST00000624617 1940 ntBASIC22.54■■□□□ 1.2
CLDN5O00501 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CLDN5O00501 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.54■■□□□ 1.2
CLDN5O00501 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLDN5O00501 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLDN5O00501 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLDN5O00501 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.53■■□□□ 1.2
CLDN5O00501 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.53■■□□□ 1.2
CLDN5O00501 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLDN5O00501 EP400NL-214ENST00000641289 2402 ntBASIC22.53■■□□□ 1.2
CLDN5O00501 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.53■■□□□ 1.2
CLDN5O00501 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLDN5O00501 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CLDN5O00501 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CLDN5O00501 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CLDN5O00501 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CLDN5O00501 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLDN5O00501 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLDN5O00501 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLDN5O00501 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CLDN5O00501 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLDN5O00501 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.52■■□□□ 1.2
CLDN5O00501 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms