Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPA2E9PIF3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.43■□□□□ 0.7
NPIPA2E9PIF3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPA2E9PIF3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPA2E9PIF3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPA2E9PIF3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPA2E9PIF3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPA2E9PIF3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPIPA2E9PIF3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPIPA2E9PIF3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPIPA2E9PIF3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPIPA2E9PIF3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NPIPA2E9PIF3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NPIPA2E9PIF3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.42■□□□□ 0.7
NPIPA2E9PIF3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.42■□□□□ 0.7
NPIPA2E9PIF3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.42■□□□□ 0.7
NPIPA2E9PIF3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.41■□□□□ 0.7
NPIPA2E9PIF3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.41■□□□□ 0.7
NPIPA2E9PIF3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPIPA2E9PIF3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPIPA2E9PIF3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NPIPA2E9PIF3 ID1-201ENST00000376105 1233 ntBASIC19.41■□□□□ 0.7
NPIPA2E9PIF3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.41■□□□□ 0.7
NPIPA2E9PIF3 AC079089.2-201ENST00000531211 1277 ntBASIC19.41■□□□□ 0.7
NPIPA2E9PIF3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NPIPA2E9PIF3 BID-214ENST00000617586 542 ntTSL 5 BASIC19.41■□□□□ 0.7
NPIPA2E9PIF3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPIPA2E9PIF3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPIPA2E9PIF3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NPIPA2E9PIF3 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.41■□□□□ 0.7
NPIPA2E9PIF3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NPIPA2E9PIF3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPIPA2E9PIF3 GUSBP5-202ENST00000510805 1989 ntBASIC19.41■□□□□ 0.7
NPIPA2E9PIF3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPIPA2E9PIF3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA2E9PIF3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA2E9PIF3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA2E9PIF3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA2E9PIF3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.4■□□□□ 0.7
NPIPA2E9PIF3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA2E9PIF3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
NPIPA2E9PIF3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA2E9PIF3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA2E9PIF3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.4■□□□□ 0.7
NPIPA2E9PIF3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.4■□□□□ 0.7
NPIPA2E9PIF3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.4■□□□□ 0.7
NPIPA2E9PIF3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.4■□□□□ 0.7
NPIPA2E9PIF3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA2E9PIF3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA2E9PIF3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.4■□□□□ 0.7
NPIPA2E9PIF3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA2E9PIF3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPA2E9PIF3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
NPIPA2E9PIF3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPA2E9PIF3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPA2E9PIF3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NPIPA2E9PIF3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.39■□□□□ 0.69
NPIPA2E9PIF3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NPIPA2E9PIF3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.39■□□□□ 0.69
NPIPA2E9PIF3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.39■□□□□ 0.69
NPIPA2E9PIF3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.39■□□□□ 0.69
NPIPA2E9PIF3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPA2E9PIF3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NPIPA2E9PIF3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPA2E9PIF3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPA2E9PIF3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPA2E9PIF3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
NPIPA2E9PIF3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPA2E9PIF3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPA2E9PIF3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPA2E9PIF3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPA2E9PIF3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPA2E9PIF3 AC137767.1-201ENST00000602918 1920 ntBASIC19.38■□□□□ 0.69
NPIPA2E9PIF3 AC073111.5-205ENST00000641717 521 ntBASIC19.38■□□□□ 0.69
NPIPA2E9PIF3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
NPIPA2E9PIF3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
NPIPA2E9PIF3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NPIPA2E9PIF3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPA2E9PIF3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 AL117328.2-201ENST00000624617 1940 ntBASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 CDCA4P2-201ENST00000441182 718 ntBASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 AC242852.2-201ENST00000615738 1807 ntBASIC19.37■□□□□ 0.69
NPIPA2E9PIF3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms