Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CFAP99D6REC4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.25■□□□□ 0.99
CFAP99D6REC4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CFAP99D6REC4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CFAP99D6REC4 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.24■□□□□ 0.99
CFAP99D6REC4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CFAP99D6REC4 MIR6084-201ENST00000622012 110 ntBASIC21.24■□□□□ 0.99
CFAP99D6REC4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CFAP99D6REC4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CFAP99D6REC4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CFAP99D6REC4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.24■□□□□ 0.99
CFAP99D6REC4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CFAP99D6REC4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.24■□□□□ 0.99
CFAP99D6REC4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP99D6REC4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP99D6REC4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP99D6REC4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP99D6REC4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP99D6REC4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP99D6REC4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP99D6REC4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP99D6REC4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.23■□□□□ 0.99
CFAP99D6REC4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.23■□□□□ 0.99
CFAP99D6REC4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP99D6REC4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP99D6REC4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP99D6REC4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.23■□□□□ 0.99
CFAP99D6REC4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP99D6REC4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.23■□□□□ 0.99
CFAP99D6REC4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP99D6REC4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP99D6REC4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP99D6REC4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP99D6REC4 AC027612.3-201ENST00000413684 1047 ntBASIC21.22■□□□□ 0.99
CFAP99D6REC4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.22■□□□□ 0.99
CFAP99D6REC4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP99D6REC4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP99D6REC4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP99D6REC4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP99D6REC4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CFAP99D6REC4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP99D6REC4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.22■□□□□ 0.99
CFAP99D6REC4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.22■□□□□ 0.99
CFAP99D6REC4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.22■□□□□ 0.99
CFAP99D6REC4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP99D6REC4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CFAP99D6REC4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP99D6REC4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP99D6REC4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.21■□□□□ 0.99
CFAP99D6REC4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP99D6REC4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP99D6REC4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CFAP99D6REC4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.21■□□□□ 0.99
CFAP99D6REC4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.21■□□□□ 0.99
CFAP99D6REC4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP99D6REC4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
CFAP99D6REC4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP99D6REC4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CFAP99D6REC4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.2■□□□□ 0.98
CFAP99D6REC4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP99D6REC4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP99D6REC4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP99D6REC4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP99D6REC4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.2■□□□□ 0.98
CFAP99D6REC4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.19■□□□□ 0.98
CFAP99D6REC4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CFAP99D6REC4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CFAP99D6REC4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CFAP99D6REC4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CFAP99D6REC4 C11orf96-202ENST00000528572 1834 ntBASIC21.19■□□□□ 0.98
CFAP99D6REC4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CFAP99D6REC4 EP400NL-214ENST00000641289 2402 ntBASIC21.19■□□□□ 0.98
CFAP99D6REC4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CFAP99D6REC4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.19■□□□□ 0.98
CFAP99D6REC4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP99D6REC4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP99D6REC4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP99D6REC4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP99D6REC4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.18■□□□□ 0.98
CFAP99D6REC4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP99D6REC4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CFAP99D6REC4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.18■□□□□ 0.98
CFAP99D6REC4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP99D6REC4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CFAP99D6REC4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP99D6REC4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP99D6REC4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CFAP99D6REC4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP99D6REC4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP99D6REC4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP99D6REC4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP99D6REC4 FAM99A-202ENST00000538190 1989 ntBASIC21.17■□□□□ 0.98
CFAP99D6REC4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CFAP99D6REC4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.17■□□□□ 0.98
CFAP99D6REC4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CFAP99D6REC4 YBX1P1-201ENST00000445822 960 ntBASIC21.17■□□□□ 0.98
CFAP99D6REC4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.17■□□□□ 0.98
CFAP99D6REC4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
CFAP99D6REC4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.17■□□□□ 0.98
CFAP99D6REC4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms