Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF25A6NGN4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF25A6NGN4 AC010141.3-201ENST00000456659 717 ntBASIC20.02■□□□□ 0.8
PRAMEF25A6NGN4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF25A6NGN4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.02■□□□□ 0.8
PRAMEF25A6NGN4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF25A6NGN4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF25A6NGN4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF25A6NGN4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.02■□□□□ 0.8
PRAMEF25A6NGN4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF25A6NGN4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
PRAMEF25A6NGN4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.02■□□□□ 0.79
PRAMEF25A6NGN4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PRAMEF25A6NGN4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.02■□□□□ 0.79
PRAMEF25A6NGN4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.02■□□□□ 0.79
PRAMEF25A6NGN4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PRAMEF25A6NGN4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF25A6NGN4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.01■□□□□ 0.79
PRAMEF25A6NGN4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF25A6NGN4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.01■□□□□ 0.79
PRAMEF25A6NGN4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.01■□□□□ 0.79
PRAMEF25A6NGN4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF25A6NGN4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.01■□□□□ 0.79
PRAMEF25A6NGN4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.01■□□□□ 0.79
PRAMEF25A6NGN4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF25A6NGN4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.01■□□□□ 0.79
PRAMEF25A6NGN4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.01■□□□□ 0.79
PRAMEF25A6NGN4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20■□□□□ 0.79
PRAMEF25A6NGN4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF25A6NGN4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF25A6NGN4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF25A6NGN4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF25A6NGN4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF25A6NGN4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF25A6NGN4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
PRAMEF25A6NGN4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF25A6NGN4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF25A6NGN4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF25A6NGN4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF25A6NGN4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.99■□□□□ 0.79
PRAMEF25A6NGN4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.99■□□□□ 0.79
PRAMEF25A6NGN4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PRAMEF25A6NGN4 ZNRF2P3-201ENST00000424200 374 ntBASIC19.99■□□□□ 0.79
PRAMEF25A6NGN4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.99■□□□□ 0.79
PRAMEF25A6NGN4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.99■□□□□ 0.79
PRAMEF25A6NGN4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
PRAMEF25A6NGN4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.99■□□□□ 0.79
PRAMEF25A6NGN4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF25A6NGN4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF25A6NGN4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.99■□□□□ 0.79
PRAMEF25A6NGN4 Z98882.1-201ENST00000622160 2253 ntBASIC19.99■□□□□ 0.79
PRAMEF25A6NGN4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF25A6NGN4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
PRAMEF25A6NGN4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF25A6NGN4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF25A6NGN4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.98■□□□□ 0.79
PRAMEF25A6NGN4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PRAMEF25A6NGN4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.98■□□□□ 0.79
PRAMEF25A6NGN4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF25A6NGN4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.98■□□□□ 0.79
PRAMEF25A6NGN4 AF106564.1-201ENST00000607058 2553 ntBASIC19.98■□□□□ 0.79
PRAMEF25A6NGN4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF25A6NGN4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF25A6NGN4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF25A6NGN4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF25A6NGN4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF25A6NGN4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF25A6NGN4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEF25A6NGN4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PRAMEF25A6NGN4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEF25A6NGN4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.97■□□□□ 0.79
PRAMEF25A6NGN4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEF25A6NGN4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.97■□□□□ 0.79
PRAMEF25A6NGN4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEF25A6NGN4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.97■□□□□ 0.79
PRAMEF25A6NGN4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.97■□□□□ 0.79
PRAMEF25A6NGN4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEF25A6NGN4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEF25A6NGN4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PRAMEF25A6NGN4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEF25A6NGN4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PRAMEF25A6NGN4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.96■□□□□ 0.79
PRAMEF25A6NGN4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PRAMEF25A6NGN4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEF25A6NGN4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEF25A6NGN4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.96■□□□□ 0.79
PRAMEF25A6NGN4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.96■□□□□ 0.79
PRAMEF25A6NGN4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEF25A6NGN4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.96■□□□□ 0.79
PRAMEF25A6NGN4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEF25A6NGN4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEF25A6NGN4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEF25A6NGN4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.96■□□□□ 0.79
PRAMEF25A6NGN4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PRAMEF25A6NGN4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEF25A6NGN4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEF25A6NGN4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEF25A6NGN4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEF25A6NGN4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEF25A6NGN4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms