Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 GABARAPL3-202ENST00000624044 1851 ntBASIC18.63■□□□□ 0.57
SHISA3A0PJX4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHISA3A0PJX4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SHISA3A0PJX4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.62■□□□□ 0.57
SHISA3A0PJX4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHISA3A0PJX4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHISA3A0PJX4 AL499627.2-201ENST00000606283 725 ntBASIC18.62■□□□□ 0.57
SHISA3A0PJX4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHISA3A0PJX4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHISA3A0PJX4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.62■□□□□ 0.57
SHISA3A0PJX4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SHISA3A0PJX4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.62■□□□□ 0.57
SHISA3A0PJX4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHISA3A0PJX4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.62■□□□□ 0.57
SHISA3A0PJX4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.62■□□□□ 0.57
SHISA3A0PJX4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.62■□□□□ 0.57
SHISA3A0PJX4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 AC103724.3-201ENST00000564481 992 ntBASIC18.61■□□□□ 0.57
SHISA3A0PJX4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SHISA3A0PJX4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.6■□□□□ 0.57
SHISA3A0PJX4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHISA3A0PJX4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHISA3A0PJX4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHISA3A0PJX4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.6■□□□□ 0.57
SHISA3A0PJX4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHISA3A0PJX4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.6■□□□□ 0.57
SHISA3A0PJX4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.6■□□□□ 0.57
SHISA3A0PJX4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.6■□□□□ 0.57
SHISA3A0PJX4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.6■□□□□ 0.57
SHISA3A0PJX4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHISA3A0PJX4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHISA3A0PJX4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHISA3A0PJX4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.6■□□□□ 0.57
SHISA3A0PJX4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHISA3A0PJX4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHISA3A0PJX4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.59■□□□□ 0.57
SHISA3A0PJX4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHISA3A0PJX4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHISA3A0PJX4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHISA3A0PJX4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.59■□□□□ 0.57
SHISA3A0PJX4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.59■□□□□ 0.57
SHISA3A0PJX4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.59■□□□□ 0.57
SHISA3A0PJX4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHISA3A0PJX4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.59■□□□□ 0.57
SHISA3A0PJX4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SHISA3A0PJX4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.59■□□□□ 0.57
SHISA3A0PJX4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.59■□□□□ 0.57
SHISA3A0PJX4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.59■□□□□ 0.57
SHISA3A0PJX4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHISA3A0PJX4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SHISA3A0PJX4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SHISA3A0PJX4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHISA3A0PJX4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHISA3A0PJX4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.58■□□□□ 0.57
SHISA3A0PJX4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.58■□□□□ 0.57
SHISA3A0PJX4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.58■□□□□ 0.57
SHISA3A0PJX4 OR7E47P-201ENST00000546390 1422 ntBASIC18.58■□□□□ 0.57
SHISA3A0PJX4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SHISA3A0PJX4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SHISA3A0PJX4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SHISA3A0PJX4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.58■□□□□ 0.57
SHISA3A0PJX4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHISA3A0PJX4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SHISA3A0PJX4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.58■□□□□ 0.56
SHISA3A0PJX4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.58■□□□□ 0.56
SHISA3A0PJX4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms