Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 Z92544.1-202ENST00000571933 1220 ntBASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 AC010997.5-201ENST00000609182 354 ntBASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IGKV3D-20A0A0C4DH25 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
IGKV3D-20A0A0C4DH25 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
IGKV3D-20A0A0C4DH25 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
IGKV3D-20A0A0C4DH25 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
IGKV3D-20A0A0C4DH25 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
IGKV3D-20A0A0C4DH25 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
IGKV3D-20A0A0C4DH25 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV3D-20A0A0C4DH25 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
IGKV3D-20A0A0C4DH25 MIR4787-201ENST00000607364 84 ntBASIC15.83■□□□□ 0.12
IGKV3D-20A0A0C4DH25 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.83■□□□□ 0.12
IGKV3D-20A0A0C4DH25 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV3D-20A0A0C4DH25 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV3D-20A0A0C4DH25 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV3D-20A0A0C4DH25 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.83■□□□□ 0.12
IGKV3D-20A0A0C4DH25 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV3D-20A0A0C4DH25 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV3D-20A0A0C4DH25 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGKV3D-20A0A0C4DH25 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.83■□□□□ 0.12
IGKV3D-20A0A0C4DH25 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
IGKV3D-20A0A0C4DH25 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.83■□□□□ 0.12
IGKV3D-20A0A0C4DH25 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV3D-20A0A0C4DH25 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
IGKV3D-20A0A0C4DH25 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.82■□□□□ 0.12
IGKV3D-20A0A0C4DH25 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
IGKV3D-20A0A0C4DH25 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV3D-20A0A0C4DH25 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.82■□□□□ 0.12
IGKV3D-20A0A0C4DH25 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV3D-20A0A0C4DH25 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV3D-20A0A0C4DH25 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV3D-20A0A0C4DH25 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
IGKV3D-20A0A0C4DH25 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV3D-20A0A0C4DH25 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV3D-20A0A0C4DH25 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV3D-20A0A0C4DH25 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.82■□□□□ 0.12
IGKV3D-20A0A0C4DH25 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC15.82■□□□□ 0.12
IGKV3D-20A0A0C4DH25 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV3D-20A0A0C4DH25 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGKV3D-20A0A0C4DH25 AL157384.1-201ENST00000445995 2473 ntBASIC15.82■□□□□ 0.12
IGKV3D-20A0A0C4DH25 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV3D-20A0A0C4DH25 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV3D-20A0A0C4DH25 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15.81■□□□□ 0.12
IGKV3D-20A0A0C4DH25 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
IGKV3D-20A0A0C4DH25 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.81■□□□□ 0.12
IGKV3D-20A0A0C4DH25 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV3D-20A0A0C4DH25 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV3D-20A0A0C4DH25 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.81■□□□□ 0.12
IGKV3D-20A0A0C4DH25 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV3D-20A0A0C4DH25 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.81■□□□□ 0.12
IGKV3D-20A0A0C4DH25 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
IGKV3D-20A0A0C4DH25 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.81■□□□□ 0.12
IGKV3D-20A0A0C4DH25 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC15.81■□□□□ 0.12
IGKV3D-20A0A0C4DH25 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.81■□□□□ 0.12
IGKV3D-20A0A0C4DH25 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC15.81■□□□□ 0.12
IGKV3D-20A0A0C4DH25 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV3D-20A0A0C4DH25 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV3D-20A0A0C4DH25 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV3D-20A0A0C4DH25 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.8■□□□□ 0.12
IGKV3D-20A0A0C4DH25 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.8■□□□□ 0.12
IGKV3D-20A0A0C4DH25 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV3D-20A0A0C4DH25 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.8■□□□□ 0.12
IGKV3D-20A0A0C4DH25 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.8■□□□□ 0.12
IGKV3D-20A0A0C4DH25 AC104564.3-201ENST00000582367 638 ntBASIC15.8■□□□□ 0.12
IGKV3D-20A0A0C4DH25 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV3D-20A0A0C4DH25 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.8■□□□□ 0.12
IGKV3D-20A0A0C4DH25 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV3D-20A0A0C4DH25 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
IGKV3D-20A0A0C4DH25 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
IGKV3D-20A0A0C4DH25 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV3D-20A0A0C4DH25 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV3D-20A0A0C4DH25 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV3D-20A0A0C4DH25 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
IGKV3D-20A0A0C4DH25 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV3D-20A0A0C4DH25 AC133637.1-201ENST00000624115 1537 ntBASIC15.79■□□□□ 0.12
IGKV3D-20A0A0C4DH25 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV3D-20A0A0C4DH25 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV3D-20A0A0C4DH25 OR7E47P-201ENST00000546390 1422 ntBASIC15.79■□□□□ 0.12
IGKV3D-20A0A0C4DH25 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.79■□□□□ 0.12
IGKV3D-20A0A0C4DH25 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV3D-20A0A0C4DH25 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms