Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV25A0A0B4J276 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
TRAV25A0A0B4J276 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
TRAV25A0A0B4J276 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV25A0A0B4J276 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV25A0A0B4J276 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV25A0A0B4J276 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV25A0A0B4J276 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV25A0A0B4J276 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
TRAV25A0A0B4J276 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
TRAV25A0A0B4J276 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV25A0A0B4J276 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.03■□□□□ 0.16
TRAV25A0A0B4J276 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAV25A0A0B4J276 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRAV25A0A0B4J276 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV25A0A0B4J276 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV25A0A0B4J276 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV25A0A0B4J276 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV25A0A0B4J276 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV25A0A0B4J276 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV25A0A0B4J276 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV25A0A0B4J276 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV25A0A0B4J276 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TRAV25A0A0B4J276 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV25A0A0B4J276 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV25A0A0B4J276 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV25A0A0B4J276 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.02■□□□□ 0.16
TRAV25A0A0B4J276 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.02■□□□□ 0.16
TRAV25A0A0B4J276 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV25A0A0B4J276 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.02■□□□□ 0.16
TRAV25A0A0B4J276 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
TRAV25A0A0B4J276 NTF6G-201ENST00000591094 616 ntBASIC16.02■□□□□ 0.16
TRAV25A0A0B4J276 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV25A0A0B4J276 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV25A0A0B4J276 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV25A0A0B4J276 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV25A0A0B4J276 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV25A0A0B4J276 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV25A0A0B4J276 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.15
TRAV25A0A0B4J276 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV25A0A0B4J276 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 KRT19P1-201ENST00000405746 1186 ntBASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV25A0A0B4J276 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV25A0A0B4J276 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16■□□□□ 0.15
TRAV25A0A0B4J276 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV25A0A0B4J276 AL117328.2-201ENST00000624617 1940 ntBASIC16■□□□□ 0.15
TRAV25A0A0B4J276 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV25A0A0B4J276 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV25A0A0B4J276 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV25A0A0B4J276 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRAV25A0A0B4J276 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16■□□□□ 0.15
TRAV25A0A0B4J276 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16■□□□□ 0.15
TRAV25A0A0B4J276 AL162430.1-201ENST00000480705 870 ntBASIC16■□□□□ 0.15
TRAV25A0A0B4J276 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16■□□□□ 0.15
TRAV25A0A0B4J276 AC104564.3-201ENST00000582367 638 ntBASIC16■□□□□ 0.15
TRAV25A0A0B4J276 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV25A0A0B4J276 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16■□□□□ 0.15
TRAV25A0A0B4J276 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV25A0A0B4J276 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV25A0A0B4J276 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms