Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV1-2A0A0B4J238 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV1-2A0A0B4J238 GABARAPL3-202ENST00000624044 1851 ntBASIC18.56■□□□□ 0.56
TRAV1-2A0A0B4J238 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV1-2A0A0B4J238 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.56■□□□□ 0.56
TRAV1-2A0A0B4J238 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRAV1-2A0A0B4J238 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV1-2A0A0B4J238 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
TRAV1-2A0A0B4J238 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV1-2A0A0B4J238 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.56■□□□□ 0.56
TRAV1-2A0A0B4J238 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
TRAV1-2A0A0B4J238 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
TRAV1-2A0A0B4J238 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV1-2A0A0B4J238 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV1-2A0A0B4J238 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV1-2A0A0B4J238 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV1-2A0A0B4J238 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV1-2A0A0B4J238 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV1-2A0A0B4J238 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV1-2A0A0B4J238 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAV1-2A0A0B4J238 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV1-2A0A0B4J238 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV1-2A0A0B4J238 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.54■□□□□ 0.56
TRAV1-2A0A0B4J238 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV1-2A0A0B4J238 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV1-2A0A0B4J238 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV1-2A0A0B4J238 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV1-2A0A0B4J238 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV1-2A0A0B4J238 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV1-2A0A0B4J238 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV1-2A0A0B4J238 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV1-2A0A0B4J238 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV1-2A0A0B4J238 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV1-2A0A0B4J238 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV1-2A0A0B4J238 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRAV1-2A0A0B4J238 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV1-2A0A0B4J238 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV1-2A0A0B4J238 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV1-2A0A0B4J238 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV1-2A0A0B4J238 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV1-2A0A0B4J238 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
TRAV1-2A0A0B4J238 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV1-2A0A0B4J238 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV1-2A0A0B4J238 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV1-2A0A0B4J238 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV1-2A0A0B4J238 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV1-2A0A0B4J238 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV1-2A0A0B4J238 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV1-2A0A0B4J238 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV1-2A0A0B4J238 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV1-2A0A0B4J238 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRAV1-2A0A0B4J238 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRAV1-2A0A0B4J238 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV1-2A0A0B4J238 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAV1-2A0A0B4J238 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
TRAV1-2A0A0B4J238 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV1-2A0A0B4J238 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV1-2A0A0B4J238 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV1-2A0A0B4J238 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV1-2A0A0B4J238 YBX1P4-201ENST00000392794 808 ntBASIC18.52■□□□□ 0.56
TRAV1-2A0A0B4J238 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAV1-2A0A0B4J238 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRAV1-2A0A0B4J238 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.52■□□□□ 0.55
TRAV1-2A0A0B4J238 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV1-2A0A0B4J238 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
TRAV1-2A0A0B4J238 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV1-2A0A0B4J238 AP005212.1-201ENST00000581547 1997 ntBASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
TRAV1-2A0A0B4J238 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms