Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRAV8-1A0A0A6YYK1 MTDHP2-201ENST00000601468 714 ntBASIC16.18■□□□□ 0.18
TRAV8-1A0A0A6YYK1 AL499627.2-201ENST00000606283 725 ntBASIC16.18■□□□□ 0.18
TRAV8-1A0A0A6YYK1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-1A0A0A6YYK1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-1A0A0A6YYK1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-1A0A0A6YYK1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV8-1A0A0A6YYK1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-1A0A0A6YYK1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRAV8-1A0A0A6YYK1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRAV8-1A0A0A6YYK1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-1A0A0A6YYK1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-1A0A0A6YYK1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRAV8-1A0A0A6YYK1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-1A0A0A6YYK1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-1A0A0A6YYK1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-1A0A0A6YYK1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-1A0A0A6YYK1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV8-1A0A0A6YYK1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-1A0A0A6YYK1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-1A0A0A6YYK1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-1A0A0A6YYK1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-1A0A0A6YYK1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-1A0A0A6YYK1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-1A0A0A6YYK1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV8-1A0A0A6YYK1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-1A0A0A6YYK1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-1A0A0A6YYK1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV8-1A0A0A6YYK1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-1A0A0A6YYK1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRAV8-1A0A0A6YYK1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV8-1A0A0A6YYK1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRAV8-1A0A0A6YYK1 LINC01006-201ENST00000333319 2292 ntBASIC16.16■□□□□ 0.18
TRAV8-1A0A0A6YYK1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-1A0A0A6YYK1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-1A0A0A6YYK1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-1A0A0A6YYK1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAV8-1A0A0A6YYK1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-1A0A0A6YYK1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-1A0A0A6YYK1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-1A0A0A6YYK1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV8-1A0A0A6YYK1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-1A0A0A6YYK1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-1A0A0A6YYK1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-1A0A0A6YYK1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 AC079089.2-201ENST00000531211 1277 ntBASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 AC104564.3-201ENST00000582367 638 ntBASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRAV8-1A0A0A6YYK1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.14■□□□□ 0.18
TRAV8-1A0A0A6YYK1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.14■□□□□ 0.18
TRAV8-1A0A0A6YYK1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-1A0A0A6YYK1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms