Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 GAB4-201ENST00000400588 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 SPDYE5-202ENST00000624640 2667 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 ANKRD49-201ENST00000302755 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 LINC00689-201ENST00000413238 4684 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 TIMM10B-201ENST00000254616 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 ERMARD-204ENST00000392095 1908 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 KLF11-206ENST00000540845 3885 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 ANKRD18CP-201ENST00000354752 2980 ntBASIC12.25□□□□□ -0.45
LMO3Q8TAP4 RANBP3-203ENST00000439268 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 SORBS3-201ENST00000240123 3459 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 TLE4-201ENST00000265284 2382 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 SIGLEC10-207ENST00000442846 2442 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 CDH5-208ENST00000614547 3779 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 PLAUR-202ENST00000339082 1254 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 KCNK16-202ENST00000373229 1248 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 CASP2-203ENST00000392925 616 ntTSL 3 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 MRPS16P3-201ENST00000415961 374 ntBASIC12.25□□□□□ -0.45
LMO3Q8TAP4 AL139390.1-201ENST00000423568 517 ntTSL 3 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 MAGI2-AS3-205ENST00000429408 634 ntTSL 3 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 PCOTH-203ENST00000435039 542 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 NOP56P1-203ENST00000440030 372 ntBASIC12.25□□□□□ -0.45
LMO3Q8TAP4 LINC01005-201ENST00000441691 540 ntTSL 4 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 AC053503.3-201ENST00000448375 114 ntBASIC12.25□□□□□ -0.45
LMO3Q8TAP4 RPS8P4-201ENST00000454541 627 ntBASIC12.25□□□□□ -0.45
LMO3Q8TAP4 AC138965.2-201ENST00000502813 568 ntTSL 4 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 ALG1L14P-201ENST00000514230 434 ntBASIC12.25□□□□□ -0.45
LMO3Q8TAP4 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 ARL2-206ENST00000533729 795 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 AL139317.2-201ENST00000556998 158 ntBASIC12.25□□□□□ -0.45
LMO3Q8TAP4 AC142086.5-202ENST00000562500 217 ntBASIC12.25□□□□□ -0.45
LMO3Q8TAP4 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 AC113385.3-201ENST00000621479 747 ntBASIC12.25□□□□□ -0.45
LMO3Q8TAP4 AC004494.2-201ENST00000623168 830 ntBASIC12.25□□□□□ -0.45
LMO3Q8TAP4 SPDL1-216ENST00000629457 340 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 RAE1-203ENST00000395841 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 AC092809.4-201ENST00000420350 1323 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 KCTD20-204ENST00000449081 4094 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 RFESD-203ENST00000458310 2788 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 AL132996.1-201ENST00000569865 1431 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 LINC01568-206ENST00000562748 1480 ntTSL 3 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 PLCD4-206ENST00000450993 3232 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 C1GALT1C1-201ENST00000304661 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 AC139493.2-201ENST00000508056 1612 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 LINC00319-202ENST00000448049 3507 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 ZNF396-206ENST00000589332 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 CSPG4P13-202ENST00000567704 4801 ntBASIC12.25□□□□□ -0.45
LMO3Q8TAP4 CDK14-202ENST00000380050 4995 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 PAX6-208ENST00000379132 2576 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
LMO3Q8TAP4 GOLGA8DP-201ENST00000314246 2786 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 CENPP-201ENST00000375576 3088 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 STRIP1-201ENST00000369795 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 CDK10-201ENST00000331006 3344 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 RBFOX1-224ENST00000641259 3651 ntBASIC12.24□□□□□ -0.45
LMO3Q8TAP4 PLEKHG5-204ENST00000377732 3753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 TYK2-201ENST00000264818 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 NUTM2A-201ENST00000381689 3974 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 RGL1-201ENST00000304685 5100 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 AC092123.2-201ENST00000611189 5421 ntBASIC12.24□□□□□ -0.45
LMO3Q8TAP4 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 TYRL-201ENST00000243152 441 ntBASIC12.24□□□□□ -0.45
LMO3Q8TAP4 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 MSH3-201ENST00000265081 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 AAMDC-201ENST00000304716 619 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 KCNK10-201ENST00000312350 2396 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 C8orf34-201ENST00000325233 2281 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 ZNF599-201ENST00000329285 3099 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 ZFYVE27-203ENST00000359980 2997 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 RNU105C-201ENST00000362342 209 ntBASIC12.24□□□□□ -0.45
LMO3Q8TAP4 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 HBD-202ENST00000380299 785 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 IGLV1-44-201ENST00000390297 467 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 IGLV1-40-201ENST00000390299 407 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 PTGES3L-AARSD1-203ENST00000409399 2042 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 TGFA-203ENST00000418333 1225 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 POLR2H-202ENST00000429568 878 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 LRRC23-205ENST00000429740 671 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 AC067945.2-201ENST00000431351 623 ntTSL 5 BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 PRAMEF32P-201ENST00000431596 1068 ntBASIC12.24□□□□□ -0.45
LMO3Q8TAP4 AC112778.1-201ENST00000433306 827 ntBASIC12.24□□□□□ -0.45
LMO3Q8TAP4 OPRM1-208ENST00000434900 2033 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 PATE2-202ENST00000436890 738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO3Q8TAP4 TEX51-204ENST00000450035 736 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms