Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC006450.1-201ENST00000421041 460 ntTSL 3 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 LINC00443-201ENST00000421601 1170 ntTSL 3 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 AC019185.2-201ENST00000424628 520 ntTSL 4 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 LINC01664-202ENST00000441544 1175 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 PHBP5-201ENST00000449310 768 ntBASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 AC132008.2-201ENST00000453454 956 ntTSL 4 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 CFL1P1-204ENST00000456375 424 ntTSL 3 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 RN7SL164P-201ENST00000482613 303 ntBASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 AC009078.2-201ENST00000489723 1254 ntTSL 2 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 AL645924.1-201ENST00000502641 220 ntTSL 5 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 AC126773.3-201ENST00000562089 893 ntBASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 TRAPPC2L-214ENST00000568583 801 ntTSL 3 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 EPHA5-205ENST00000613740 8355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 FYCO1-201ENST00000296137 8504 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 RBM3-203ENST00000376759 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 UQCRHL-201ENST00000483273 2180 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 NKAPL-201ENST00000343684 1639 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 CCDC89-201ENST00000316398 1412 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 CLIP3-201ENST00000360535 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 SPATA4-203ENST00000515234 2115 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 MAP3K14-202ENST00000376926 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 SPAG5-201ENST00000321765 4040 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 LRP2-202ENST00000443831 4007 ntTSL 2 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 LRRC55-201ENST00000497933 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 CA13-201ENST00000321764 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 USP20-203ENST00000372429 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 AC093583.1-201ENST00000462083 2383 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 ZMYND11-205ENST00000381607 3898 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 ZNF16-202ENST00000394909 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 PCNX4-204ENST00000406949 3513 ntTSL 2 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 CH25H-201ENST00000371852 1686 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 AC022113.1-201ENST00000499131 1674 ntTSL 2 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 ARHGAP27-212ENST00000532038 3694 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 SLC2A5-202ENST00000377424 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 SYT10-201ENST00000228567 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 ZNF266-206ENST00000592292 3100 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 AC010201.2-201ENST00000605595 1495 ntBASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 AIRN-202ENST00000609176 1489 ntTSL 5 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 FETUB-201ENST00000265029 1627 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 SLC24A1-202ENST00000339868 5678 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 IKZF4-202ENST00000431367 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 LINC00222-202ENST00000416104 1785 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 MYT1-203ENST00000536311 5614 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 TGFA-201ENST00000295400 4310 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 EFNB2-201ENST00000245323 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 SMOC1-202ENST00000381280 3666 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 WARS2-IT1-201ENST00000423984 2060 ntTSL 2 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 TAAR6-201ENST00000275198 1038 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 AC073834.1-201ENST00000357045 590 ntTSL 4 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 RPS8-202ENST00000396651 881 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 PDHX-202ENST00000430469 952 ntTSL 2 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 AL589674.1-201ENST00000454401 222 ntTSL 5 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 AL358115.1-202ENST00000455257 675 ntTSL 3 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 AL031432.1-201ENST00000455902 988 ntTSL 3 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 RN7SL704P-201ENST00000478699 274 ntBASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 EHMT1-210ENST00000478940 591 ntTSL 4 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 AP001528.1-201ENST00000499504 1223 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 AC020656.1-201ENST00000548900 599 ntTSL 3 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 AC010203.2-201ENST00000550886 418 ntTSL 3 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 AC026495.1-201ENST00000556397 530 ntTSL 4 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 AC009034.1-201ENST00000568125 669 ntTSL 2 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 HP-216ENST00000570083 1270 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 HKR1-222ENST00000591417 525 ntTSL 4 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 METTL23-213ENST00000591571 585 ntTSL 3 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 ZNF83-213ENST00000598536 522 ntTSL 4 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 AL157392.3-218ENST00000600249 773 ntTSL 5 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 AC100835.2-201ENST00000617850 479 ntBASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 AL512324.1-201ENST00000618885 217 ntBASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 Metazoa_SRP.76-201ENST00000619429 290 ntBASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 AC005609.5-202ENST00000624176 513 ntTSL 4 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 AL139035.1-202ENST00000626308 565 ntTSL 4 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 Z98752.4-201ENST00000635579 588 ntBASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 5_8S_rRNA.4-201ENST00000636054 151 ntBASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 MED24-212ENST00000501516 3037 ntTSL 5 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 SVIL-201ENST00000355867 7586 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 PRAMEF7-201ENST00000330881 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 AC074091.1-201ENST00000505973 1741 ntTSL 2 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 FER1L6-AS2-201ENST00000520031 1746 ntTSL 2 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 JMJD7-PLA2G4B-201ENST00000342159 2966 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 SEC61A1-203ENST00000464451 1871 ntTSL 2 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 STAT2-201ENST00000314128 3259 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 HOPX-205ENST00000420433 1543 ntTSL 5 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 AC110615.1-201ENST00000438151 1955 ntBASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 FOXO4-202ENST00000374259 3301 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms