Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 IKZF5-205ENST00000617859 4542 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 ZNF44-203ENST00000356109 2706 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SLC1A1P43005 CARMN-209ENST00000602315 2706 ntTSL 5 BASIC12.13□□□□□ -0.47
SLC1A1P43005 ARID1B-230ENST00000637810 5073 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 PLEKHG5-204ENST00000377732 3753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
SLC1A1P43005 OXNAD1-209ENST00000627468 3983 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SLC1A1P43005 ROR2-201ENST00000375708 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 URM1-203ENST00000372853 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 BLZF1-201ENST00000329281 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 SELENOK-204ENST00000495461 1633 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 MAPK10-229ENST00000513186 1618 ntTSL 4 BASIC12.13□□□□□ -0.47
SLC1A1P43005 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 CDK5-201ENST00000297518 783 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 SPATA3-203ENST00000424440 1011 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 ERG-209ENST00000429727 1052 ntTSL 5 BASIC12.13□□□□□ -0.47
SLC1A1P43005 AC017006.1-201ENST00000450080 364 ntTSL 4 BASIC12.13□□□□□ -0.47
SLC1A1P43005 AL390726.1-201ENST00000451357 202 ntBASIC12.13□□□□□ -0.47
SLC1A1P43005 AC099541.1-201ENST00000453828 670 ntTSL 2 BASIC12.13□□□□□ -0.47
SLC1A1P43005 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 CRHBP-203ENST00000506501 912 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 AACSP1-202ENST00000521412 1095 ntBASIC12.13□□□□□ -0.47
SLC1A1P43005 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SLC1A1P43005 COPZ1-206ENST00000549043 1232 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 AL139022.1-202ENST00000553633 796 ntTSL 2 BASIC12.13□□□□□ -0.47
SLC1A1P43005 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC12.13□□□□□ -0.47
SLC1A1P43005 AC015818.3-201ENST00000583797 589 ntBASIC12.13□□□□□ -0.47
SLC1A1P43005 CDRT1-207ENST00000583965 562 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 AFMID-205ENST00000586731 550 ntTSL 3 BASIC12.13□□□□□ -0.47
SLC1A1P43005 AFMID-210ENST00000589256 578 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 AL360272.1-201ENST00000605501 585 ntBASIC12.13□□□□□ -0.47
SLC1A1P43005 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SLC1A1P43005 ABHD11-AS1-202ENST00000641969 358 ntBASIC12.13□□□□□ -0.47
SLC1A1P43005 SCN5A-209ENST00000451551 8343 ntTSL 5 BASIC12.13□□□□□ -0.47
SLC1A1P43005 UGT1A9-201ENST00000354728 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 CWC25-202ENST00000614790 3234 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 AP4B1-AS1-201ENST00000419536 1734 ntTSL 2 BASIC12.13□□□□□ -0.47
SLC1A1P43005 ZNF669-204ENST00000448299 1718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 GNE-203ENST00000447283 2174 ntTSL 5 BASIC12.13□□□□□ -0.47
SLC1A1P43005 KIAA1191-212ENST00000614420 2631 ntTSL 5 BASIC12.13□□□□□ -0.47
SLC1A1P43005 SPDYA-201ENST00000334056 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 ARSJ-201ENST00000315366 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 ZNF248-203ENST00000395867 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 PTGIS-201ENST00000244043 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 TMEM164-202ENST00000372068 5566 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 SOHLH2-201ENST00000317764 1909 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 CPEB1-208ENST00000611163 1919 ntTSL 2 BASIC12.13□□□□□ -0.47
SLC1A1P43005 AAGAB-201ENST00000261880 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 STRIP1-201ENST00000369795 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 AL359736.1-201ENST00000382141 4157 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SLC1A1P43005 KCNMB1-201ENST00000274629 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 RNLS-202ENST00000371947 3385 ntTSL 2 BASIC12.13□□□□□ -0.47
SLC1A1P43005 DDX11-AS1-201ENST00000500527 2031 ntTSL 2 BASIC12.13□□□□□ -0.47
SLC1A1P43005 SERF1A-209ENST00000513436 1693 ntTSL 3 BASIC12.13□□□□□ -0.47
SLC1A1P43005 BOLL-202ENST00000321801 3135 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
SLC1A1P43005 ATG5-204ENST00000369076 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 ADD1-210ENST00000503455 3206 ntTSL 5 BASIC12.13□□□□□ -0.47
SLC1A1P43005 YPEL2-201ENST00000312655 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SLC1A1P43005 AGPAT4-IT1-201ENST00000624499 1878 ntBASIC12.12□□□□□ -0.47
SLC1A1P43005 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SLC1A1P43005 ADGRE5-202ENST00000357355 3054 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SLC1A1P43005 PDE4C-203ENST00000447275 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SLC1A1P43005 AL353801.2-201ENST00000436877 1444 ntTSL 5 BASIC12.12□□□□□ -0.47
SLC1A1P43005 RAP1GAP2-202ENST00000366401 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SLC1A1P43005 ATP2B3-203ENST00000359149 4234 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SLC1A1P43005 DCAF4-213ENST00000555042 2374 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
SLC1A1P43005 AC005837.1-201ENST00000565271 1717 ntBASIC12.12□□□□□ -0.47
SLC1A1P43005 AL713866.1-201ENST00000563320 3125 ntBASIC12.12□□□□□ -0.47
SLC1A1P43005 CLUHP3-201ENST00000254109 1812 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SLC1A1P43005 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SLC1A1P43005 CLSTN3-201ENST00000266546 4185 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SLC1A1P43005 POLR2M-201ENST00000299638 4199 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SLC1A1P43005 SEC23B-204ENST00000377475 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SLC1A1P43005 AL391421.1-201ENST00000372387 1922 ntTSL 2 BASIC12.12□□□□□ -0.47
SLC1A1P43005 IKZF4-202ENST00000431367 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SLC1A1P43005 RN7SKP176-201ENST00000363673 318 ntBASIC12.12□□□□□ -0.47
SLC1A1P43005 IGLV1-50-201ENST00000390291 405 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SLC1A1P43005 AC008268.1-201ENST00000425887 1119 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SLC1A1P43005 ZNF776-202ENST00000431353 549 ntTSL 4 BASIC12.12□□□□□ -0.47
SLC1A1P43005 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC12.12□□□□□ -0.47
SLC1A1P43005 LINC00106-202ENST00000434938 356 ntTSL 5 BASIC12.12□□□□□ -0.47
SLC1A1P43005 AC007163.1-201ENST00000447972 877 ntTSL 5 BASIC12.12□□□□□ -0.47
SLC1A1P43005 AC022540.1-201ENST00000448214 965 ntTSL 5 BASIC12.12□□□□□ -0.47
SLC1A1P43005 TIMM23B-202ENST00000451577 1152 ntTSL 2 BASIC12.12□□□□□ -0.47
SLC1A1P43005 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
SLC1A1P43005 AC119749.1-201ENST00000454884 691 ntBASIC12.12□□□□□ -0.47
SLC1A1P43005 LINC01140-203ENST00000469312 1298 ntTSL 5 BASIC12.12□□□□□ -0.47
SLC1A1P43005 RN7SL278P-201ENST00000488843 296 ntBASIC12.12□□□□□ -0.47
SLC1A1P43005 AC008040.3-201ENST00000493762 1232 ntBASIC12.12□□□□□ -0.47
SLC1A1P43005 MIOXP1-201ENST00000521205 835 ntBASIC12.12□□□□□ -0.47
SLC1A1P43005 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC12.12□□□□□ -0.47
SLC1A1P43005 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC12.12□□□□□ -0.47
SLC1A1P43005 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC12.12□□□□□ -0.47
SLC1A1P43005 PIMREG-209ENST00000576056 833 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
SLC1A1P43005 Metazoa_SRP.194-201ENST00000612213 283 ntBASIC12.12□□□□□ -0.47
SLC1A1P43005 AL662899.3-202ENST00000617558 991 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SLC1A1P43005 AL935212.4-201ENST00000618569 232 ntBASIC12.12□□□□□ -0.47
SLC1A1P43005 SATB1-AS1-262ENST00000629984 759 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms