Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 ZAN-207ENST00000620596 8396 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 LGALS8-208ENST00000416919 6097 ntTSL 5 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 LINC01018-201ENST00000505626 3036 ntTSL 2 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 TROAP-202ENST00000380327 675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 IGKV3D-20-201ENST00000390270 445 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 IGLV1-40-201ENST00000390299 407 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 AC007249.1-201ENST00000404616 494 ntTSL 5 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 OR10AA1P-201ENST00000417823 937 ntBASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 AL121983.2-204ENST00000430592 448 ntTSL 3 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 AC106875.1-202ENST00000435175 1170 ntTSL 3 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 AL590440.1-201ENST00000436960 428 ntTSL 2 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 AL160270.1-201ENST00000439960 631 ntTSL 5 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 AC002456.1-202ENST00000441971 450 ntTSL 2 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 ARSDP1-201ENST00000443820 1215 ntBASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 AC072022.2-201ENST00000449623 672 ntTSL 2 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 AC073517.1-201ENST00000468165 541 ntTSL 4 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 HLA-DPB2-206ENST00000470997 776 ntBASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 IGKV3-20-201ENST00000492167 400 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 KIAA0930-213ENST00000492273 403 ntTSL 3 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 AC136628.2-201ENST00000505650 1142 ntBASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 AC020893.2-201ENST00000506083 723 ntBASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 TRPC7-AS2-201ENST00000513958 706 ntTSL 5 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 AC091114.1-202ENST00000521991 785 ntTSL 2 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 SLC39A9-210ENST00000557046 855 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 PIMREG-209ENST00000576056 833 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 AC008761.2-201ENST00000600512 419 ntTSL 5 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 ZNF766-208ENST00000600821 568 ntTSL 4 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 BX255925.2-201ENST00000605600 515 ntBASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 BX510359.6-201ENST00000615765 343 ntBASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 Metazoa_SRP.49-201ENST00000616811 283 ntBASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 AC241644.3-202ENST00000622634 535 ntTSL 5 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 ERGIC3-220ENST00000640748 832 ntTSL 5 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 AC026746.1-203ENST00000513386 1676 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 FBXO10-202ENST00000432825 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 AC018861.1-201ENST00000518404 1614 ntBASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 GALK2-216ENST00000560031 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 LINC01070-201ENST00000561786 2829 ntTSL 2 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 ZBTB20-212ENST00000474710 2757 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 EIF2B2-201ENST00000266126 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 NVL-201ENST00000281701 3123 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 PAX5-205ENST00000377853 1487 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 SPATA22-203ENST00000397168 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 PTGR2-201ENST00000267568 2559 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 AC122129.1-201ENST00000354746 1815 ntBASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 ANO1-207ENST00000530676 3289 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 BTBD10-201ENST00000278174 2504 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 CCAR2-206ENST00000520861 3560 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 GALNT14-203ENST00000406653 2496 ntTSL 2 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 TMEM38B-202ENST00000374692 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 EPHA5-206ENST00000622150 8421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 CLIP1-203ENST00000361654 5568 ntTSL 5 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 LAS1L-203ENST00000374811 2439 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 GBP1P1-201ENST00000394662 1740 ntBASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 SIRT5-204ENST00000397350 4382 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 SAR1B-201ENST00000402673 6682 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 CAMK1G-201ENST00000009105 2612 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 ELMO2-204ENST00000396391 3574 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 TCP1P1-201ENST00000412860 1610 ntBASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 AL139005.1-201ENST00000623899 1635 ntBASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 MAP10-201ENST00000418460 3516 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 ZNF581-201ENST00000270451 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 NDUFA7-201ENST00000301457 601 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 OR4A5-201ENST00000319760 1071 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 HNRNPA1P61-201ENST00000342073 924 ntBASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 RN7SKP176-201ENST00000363673 318 ntBASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 MRPL55-212ENST00000366739 641 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 UFC1-201ENST00000368003 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 SPANXA2-201ENST00000370518 691 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 SPANXA1-201ENST00000370519 691 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 AC074397.1-201ENST00000418013 1010 ntBASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 KRTAP13-5P-201ENST00000418755 499 ntBASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 AC097523.1-201ENST00000429515 637 ntBASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 CIDECP-205ENST00000433871 770 ntBASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 NDUFB5-205ENST00000472629 744 ntTSL 3 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 AC022121.1-201ENST00000484584 579 ntBASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 HNRNPA1P12-201ENST00000515379 961 ntBASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 MIR2277-201ENST00000515916 93 ntBASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 AC021678.2-201ENST00000521731 887 ntTSL 2 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 AC011676.4-201ENST00000523604 413 ntTSL 3 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 AC073578.1-201ENST00000535133 493 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 NKAPP1-203ENST00000554109 573 ntTSL 4 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 ERH-202ENST00000555373 586 ntTSL 2 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 AC087190.3-201ENST00000562893 753 ntTSL 3 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 AC018371.2-201ENST00000583051 913 ntBASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 ZNF581-204ENST00000588537 1100 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 AC079882.1-201ENST00000609433 375 ntBASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 TMC2-201ENST00000358864 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NPIPA3F8WFD2 VWDE-206ENST00000614403 4701 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms