Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 BID-204ENST00000399767 2129 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01558Q9Y6Z2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
LINC01558Q9Y6Z2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 HCG11-201ENST00000411553 5696 ntBASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01558Q9Y6Z2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
LINC01558Q9Y6Z2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01558Q9Y6Z2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
LINC01558Q9Y6Z2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
LINC01558Q9Y6Z2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01558Q9Y6Z2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LINC01558Q9Y6Z2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
LINC01558Q9Y6Z2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms