Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AC104564.3-201ENST00000582367 638 ntBASIC25.55■■□□□ 1.68
DDX49Q9Y6V7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.55■■□□□ 1.68
DDX49Q9Y6V7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.55■■□□□ 1.68
DDX49Q9Y6V7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
DDX49Q9Y6V7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC25.54■■□□□ 1.68
DDX49Q9Y6V7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC25.54■■□□□ 1.68
DDX49Q9Y6V7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX49Q9Y6V7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
DDX49Q9Y6V7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX49Q9Y6V7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX49Q9Y6V7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX49Q9Y6V7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.54■■□□□ 1.68
DDX49Q9Y6V7 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.54■■□□□ 1.68
DDX49Q9Y6V7 AL031602.1-201ENST00000633169 911 ntBASIC25.54■■□□□ 1.68
DDX49Q9Y6V7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.54■■□□□ 1.68
DDX49Q9Y6V7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.54■■□□□ 1.68
DDX49Q9Y6V7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
DDX49Q9Y6V7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX49Q9Y6V7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
DDX49Q9Y6V7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX49Q9Y6V7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
DDX49Q9Y6V7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX49Q9Y6V7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.53■■□□□ 1.68
DDX49Q9Y6V7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
DDX49Q9Y6V7 AC010525.1-201ENST00000585559 441 ntBASIC25.53■■□□□ 1.68
DDX49Q9Y6V7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
DDX49Q9Y6V7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX49Q9Y6V7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX49Q9Y6V7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
DDX49Q9Y6V7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
DDX49Q9Y6V7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
DDX49Q9Y6V7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX49Q9Y6V7 AC010542.4-201ENST00000563151 1910 ntBASIC25.53■■□□□ 1.68
DDX49Q9Y6V7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.53■■□□□ 1.68
DDX49Q9Y6V7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX49Q9Y6V7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
DDX49Q9Y6V7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
DDX49Q9Y6V7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
DDX49Q9Y6V7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC25.52■■□□□ 1.68
DDX49Q9Y6V7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC25.52■■□□□ 1.68
DDX49Q9Y6V7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
DDX49Q9Y6V7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.52■■□□□ 1.68
DDX49Q9Y6V7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
DDX49Q9Y6V7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.51■■□□□ 1.68
DDX49Q9Y6V7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.51■■□□□ 1.67
DDX49Q9Y6V7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
DDX49Q9Y6V7 AC005229.4-201ENST00000610085 2198 ntBASIC25.51■■□□□ 1.67
DDX49Q9Y6V7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX49Q9Y6V7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC25.51■■□□□ 1.67
DDX49Q9Y6V7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX49Q9Y6V7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX49Q9Y6V7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
DDX49Q9Y6V7 AC126544.1-201ENST00000580842 1059 ntBASIC25.51■■□□□ 1.67
DDX49Q9Y6V7 TSPY26P-201ENST00000476365 1326 ntBASIC25.51■■□□□ 1.67
DDX49Q9Y6V7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.51■■□□□ 1.67
DDX49Q9Y6V7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX49Q9Y6V7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX49Q9Y6V7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 AC073130.3-201ENST00000624389 2278 ntBASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC25.5■■□□□ 1.67
DDX49Q9Y6V7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
DDX49Q9Y6V7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
DDX49Q9Y6V7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.49■■□□□ 1.67
DDX49Q9Y6V7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
DDX49Q9Y6V7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
DDX49Q9Y6V7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
DDX49Q9Y6V7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC25.49■■□□□ 1.67
DDX49Q9Y6V7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX49Q9Y6V7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
DDX49Q9Y6V7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX49Q9Y6V7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.48■■□□□ 1.67
DDX49Q9Y6V7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.48■■□□□ 1.67
DDX49Q9Y6V7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX49Q9Y6V7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.48■■□□□ 1.67
DDX49Q9Y6V7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
DDX49Q9Y6V7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.48■■□□□ 1.67
DDX49Q9Y6V7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.48■■□□□ 1.67
DDX49Q9Y6V7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
DDX49Q9Y6V7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX49Q9Y6V7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX49Q9Y6V7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX49Q9Y6V7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX49Q9Y6V7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms