Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA3Q9Y5H0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGA3Q9Y5H0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
PCDHGA3Q9Y5H0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA3Q9Y5H0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
PCDHGA3Q9Y5H0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA3Q9Y5H0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA3Q9Y5H0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHGA3Q9Y5H0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGA3Q9Y5H0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PCDHGA3Q9Y5H0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA3Q9Y5H0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA3Q9Y5H0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PCDHGA3Q9Y5H0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA3Q9Y5H0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA3Q9Y5H0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA3Q9Y5H0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA3Q9Y5H0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA3Q9Y5H0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PCDHGA3Q9Y5H0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA3Q9Y5H0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA3Q9Y5H0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHGA3Q9Y5H0 KRT18P11-201ENST00000435214 1283 ntBASIC20.73■□□□□ 0.91
PCDHGA3Q9Y5H0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.73■□□□□ 0.91
PCDHGA3Q9Y5H0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.73■□□□□ 0.91
PCDHGA3Q9Y5H0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.73■□□□□ 0.91
PCDHGA3Q9Y5H0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.73■□□□□ 0.91
PCDHGA3Q9Y5H0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHGA3Q9Y5H0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA3Q9Y5H0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGA3Q9Y5H0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGA3Q9Y5H0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGA3Q9Y5H0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA3Q9Y5H0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDHGA3Q9Y5H0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGA3Q9Y5H0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA3Q9Y5H0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PCDHGA3Q9Y5H0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PCDHGA3Q9Y5H0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGA3Q9Y5H0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA3Q9Y5H0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA3Q9Y5H0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA3Q9Y5H0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA3Q9Y5H0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA3Q9Y5H0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA3Q9Y5H0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA3Q9Y5H0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHGA3Q9Y5H0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGA3Q9Y5H0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGA3Q9Y5H0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDHGA3Q9Y5H0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA3Q9Y5H0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGA3Q9Y5H0 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDHGA3Q9Y5H0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA3Q9Y5H0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA3Q9Y5H0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHGA3Q9Y5H0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA3Q9Y5H0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PCDHGA3Q9Y5H0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHGA3Q9Y5H0 LINC00526-201ENST00000581067 1875 ntBASIC20.71■□□□□ 0.91
PCDHGA3Q9Y5H0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.7■□□□□ 0.91
PCDHGA3Q9Y5H0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PCDHGA3Q9Y5H0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA3Q9Y5H0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA3Q9Y5H0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA3Q9Y5H0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA3Q9Y5H0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PCDHGA3Q9Y5H0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA3Q9Y5H0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PCDHGA3Q9Y5H0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGA3Q9Y5H0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA3Q9Y5H0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA3Q9Y5H0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA3Q9Y5H0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA3Q9Y5H0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGA3Q9Y5H0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA3Q9Y5H0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA3Q9Y5H0 AC079140.4-201ENST00000507448 529 ntBASIC20.69■□□□□ 0.9
PCDHGA3Q9Y5H0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.69■□□□□ 0.9
PCDHGA3Q9Y5H0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHGA3Q9Y5H0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA3Q9Y5H0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.69■□□□□ 0.9
PCDHGA3Q9Y5H0 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.69■□□□□ 0.9
PCDHGA3Q9Y5H0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGA3Q9Y5H0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
PCDHGA3Q9Y5H0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA3Q9Y5H0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA3Q9Y5H0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHGA3Q9Y5H0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
PCDHGA3Q9Y5H0 AC137767.1-201ENST00000602918 1920 ntBASIC20.68■□□□□ 0.9
PCDHGA3Q9Y5H0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA3Q9Y5H0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA3Q9Y5H0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA3Q9Y5H0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA3Q9Y5H0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA3Q9Y5H0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms