Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.02■□□□□ 0.64
LSM2Q9Y333 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.02■□□□□ 0.64
LSM2Q9Y333 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LSM2Q9Y333 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.02■□□□□ 0.64
LSM2Q9Y333 AL031602.1-201ENST00000633169 911 ntBASIC19.02■□□□□ 0.64
LSM2Q9Y333 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LSM2Q9Y333 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LSM2Q9Y333 AP005212.1-201ENST00000581547 1997 ntBASIC19.02■□□□□ 0.64
LSM2Q9Y333 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LSM2Q9Y333 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LSM2Q9Y333 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LSM2Q9Y333 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LSM2Q9Y333 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSM2Q9Y333 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.01■□□□□ 0.63
LSM2Q9Y333 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.01■□□□□ 0.63
LSM2Q9Y333 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.01■□□□□ 0.63
LSM2Q9Y333 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSM2Q9Y333 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LSM2Q9Y333 AC010980.1-201ENST00000587192 1142 ntBASIC19.01■□□□□ 0.63
LSM2Q9Y333 AC137630.3-201ENST00000607245 391 ntBASIC19.01■□□□□ 0.63
LSM2Q9Y333 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSM2Q9Y333 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.01■□□□□ 0.63
LSM2Q9Y333 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSM2Q9Y333 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LSM2Q9Y333 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LSM2Q9Y333 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSM2Q9Y333 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.01■□□□□ 0.63
LSM2Q9Y333 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSM2Q9Y333 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LSM2Q9Y333 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSM2Q9Y333 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
LSM2Q9Y333 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19■□□□□ 0.63
LSM2Q9Y333 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19■□□□□ 0.63
LSM2Q9Y333 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LSM2Q9Y333 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19■□□□□ 0.63
LSM2Q9Y333 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
LSM2Q9Y333 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19■□□□□ 0.63
LSM2Q9Y333 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19■□□□□ 0.63
LSM2Q9Y333 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19■□□□□ 0.63
LSM2Q9Y333 MIR4508-201ENST00000584178 70 ntBASIC19■□□□□ 0.63
LSM2Q9Y333 AL499627.2-201ENST00000606283 725 ntBASIC19■□□□□ 0.63
LSM2Q9Y333 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LSM2Q9Y333 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
LSM2Q9Y333 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
LSM2Q9Y333 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19■□□□□ 0.63
LSM2Q9Y333 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LSM2Q9Y333 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19■□□□□ 0.63
LSM2Q9Y333 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LSM2Q9Y333 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19■□□□□ 0.63
LSM2Q9Y333 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19■□□□□ 0.63
LSM2Q9Y333 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19■□□□□ 0.63
LSM2Q9Y333 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LSM2Q9Y333 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19■□□□□ 0.63
LSM2Q9Y333 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LSM2Q9Y333 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.99■□□□□ 0.63
LSM2Q9Y333 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSM2Q9Y333 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSM2Q9Y333 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.99■□□□□ 0.63
LSM2Q9Y333 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LSM2Q9Y333 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSM2Q9Y333 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSM2Q9Y333 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LSM2Q9Y333 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.99■□□□□ 0.63
LSM2Q9Y333 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.99■□□□□ 0.63
LSM2Q9Y333 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSM2Q9Y333 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LSM2Q9Y333 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LSM2Q9Y333 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSM2Q9Y333 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.99■□□□□ 0.63
LSM2Q9Y333 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LSM2Q9Y333 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.98■□□□□ 0.63
LSM2Q9Y333 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM2Q9Y333 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LSM2Q9Y333 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LSM2Q9Y333 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM2Q9Y333 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LSM2Q9Y333 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.98■□□□□ 0.63
LSM2Q9Y333 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.98■□□□□ 0.63
LSM2Q9Y333 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.98■□□□□ 0.63
LSM2Q9Y333 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.98■□□□□ 0.63
LSM2Q9Y333 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM2Q9Y333 OR7E47P-201ENST00000546390 1422 ntBASIC18.98■□□□□ 0.63
LSM2Q9Y333 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM2Q9Y333 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.98■□□□□ 0.63
LSM2Q9Y333 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM2Q9Y333 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.97■□□□□ 0.63
LSM2Q9Y333 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.97■□□□□ 0.63
LSM2Q9Y333 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.97■□□□□ 0.63
LSM2Q9Y333 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSM2Q9Y333 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSM2Q9Y333 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSM2Q9Y333 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LSM2Q9Y333 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LSM2Q9Y333 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.97■□□□□ 0.63
LSM2Q9Y333 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSM2Q9Y333 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.97■□□□□ 0.63
LSM2Q9Y333 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LSM2Q9Y333 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
LSM2Q9Y333 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LSM2Q9Y333 AC073314.1-201ENST00000568729 2216 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms