Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 HES6-204ENST00000409182 863 ntTSL 2 BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 OXCT2P1-201ENST00000447263 1535 ntBASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 KRT125P-201ENST00000546827 989 ntBASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBE2D4Q9Y2X8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2D4Q9Y2X8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBE2D4Q9Y2X8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBE2D4Q9Y2X8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
UBE2D4Q9Y2X8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBE2D4Q9Y2X8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
UBE2D4Q9Y2X8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
UBE2D4Q9Y2X8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC14.84□□□□□ -0.03
UBE2D4Q9Y2X8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBE2D4Q9Y2X8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBE2D4Q9Y2X8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
UBE2D4Q9Y2X8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.84□□□□□ -0.03
UBE2D4Q9Y2X8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBE2D4Q9Y2X8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBE2D4Q9Y2X8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBE2D4Q9Y2X8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
UBE2D4Q9Y2X8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
UBE2D4Q9Y2X8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
UBE2D4Q9Y2X8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
UBE2D4Q9Y2X8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
UBE2D4Q9Y2X8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
UBE2D4Q9Y2X8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
UBE2D4Q9Y2X8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
UBE2D4Q9Y2X8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.83□□□□□ -0.03
UBE2D4Q9Y2X8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
UBE2D4Q9Y2X8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
UBE2D4Q9Y2X8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBE2D4Q9Y2X8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
UBE2D4Q9Y2X8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.83□□□□□ -0.04
UBE2D4Q9Y2X8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBE2D4Q9Y2X8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC14.83□□□□□ -0.04
UBE2D4Q9Y2X8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBE2D4Q9Y2X8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC14.83□□□□□ -0.04
UBE2D4Q9Y2X8 Z92544.1-202ENST00000571933 1220 ntBASIC14.83□□□□□ -0.04
UBE2D4Q9Y2X8 AC010997.5-201ENST00000609182 354 ntBASIC14.83□□□□□ -0.04
UBE2D4Q9Y2X8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms