Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
MRPS28Q9Y2Q9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MRPS28Q9Y2Q9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MRPS28Q9Y2Q9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MRPS28Q9Y2Q9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MRPS28Q9Y2Q9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MRPS28Q9Y2Q9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MRPS28Q9Y2Q9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MRPS28Q9Y2Q9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MRPS28Q9Y2Q9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.39■□□□□ 0.53
MRPS28Q9Y2Q9 AC068587.7-201ENST00000641602 218 ntBASIC18.39■□□□□ 0.53
MRPS28Q9Y2Q9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MRPS28Q9Y2Q9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.39■□□□□ 0.53
MRPS28Q9Y2Q9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MRPS28Q9Y2Q9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MRPS28Q9Y2Q9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MRPS28Q9Y2Q9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.39■□□□□ 0.53
MRPS28Q9Y2Q9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.39■□□□□ 0.53
MRPS28Q9Y2Q9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MRPS28Q9Y2Q9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.39■□□□□ 0.53
MRPS28Q9Y2Q9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MRPS28Q9Y2Q9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.38■□□□□ 0.53
MRPS28Q9Y2Q9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
MRPS28Q9Y2Q9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MRPS28Q9Y2Q9 KRT16P3-201ENST00000439127 1283 ntBASIC18.38■□□□□ 0.53
MRPS28Q9Y2Q9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.38■□□□□ 0.53
MRPS28Q9Y2Q9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.38■□□□□ 0.53
MRPS28Q9Y2Q9 AC099791.2-201ENST00000605725 427 ntBASIC18.38■□□□□ 0.53
MRPS28Q9Y2Q9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MRPS28Q9Y2Q9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MRPS28Q9Y2Q9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MRPS28Q9Y2Q9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
MRPS28Q9Y2Q9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MRPS28Q9Y2Q9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPS28Q9Y2Q9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
MRPS28Q9Y2Q9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPS28Q9Y2Q9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPS28Q9Y2Q9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPS28Q9Y2Q9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MRPS28Q9Y2Q9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.37■□□□□ 0.53
MRPS28Q9Y2Q9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.37■□□□□ 0.53
MRPS28Q9Y2Q9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.37■□□□□ 0.53
MRPS28Q9Y2Q9 AC087239.1-201ENST00000622671 572 ntBASIC18.37■□□□□ 0.53
MRPS28Q9Y2Q9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
MRPS28Q9Y2Q9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.37■□□□□ 0.53
MRPS28Q9Y2Q9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPS28Q9Y2Q9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MRPS28Q9Y2Q9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MRPS28Q9Y2Q9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPS28Q9Y2Q9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPS28Q9Y2Q9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPS28Q9Y2Q9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.35■□□□□ 0.53
MRPS28Q9Y2Q9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPS28Q9Y2Q9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.35■□□□□ 0.53
MRPS28Q9Y2Q9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPS28Q9Y2Q9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPS28Q9Y2Q9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPS28Q9Y2Q9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPS28Q9Y2Q9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPS28Q9Y2Q9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.35■□□□□ 0.53
MRPS28Q9Y2Q9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.35■□□□□ 0.53
MRPS28Q9Y2Q9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.35■□□□□ 0.53
MRPS28Q9Y2Q9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.34■□□□□ 0.53
MRPS28Q9Y2Q9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.34■□□□□ 0.53
MRPS28Q9Y2Q9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPS28Q9Y2Q9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
MRPS28Q9Y2Q9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.34■□□□□ 0.53
MRPS28Q9Y2Q9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.34■□□□□ 0.53
MRPS28Q9Y2Q9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPS28Q9Y2Q9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPS28Q9Y2Q9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MRPS28Q9Y2Q9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
MRPS28Q9Y2Q9 OR2I1P-207ENST00000453522 948 ntBASIC18.34■□□□□ 0.53
MRPS28Q9Y2Q9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.34■□□□□ 0.53
MRPS28Q9Y2Q9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPS28Q9Y2Q9 AL356740.2-201ENST00000601559 647 ntBASIC18.34■□□□□ 0.53
MRPS28Q9Y2Q9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
MRPS28Q9Y2Q9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.34■□□□□ 0.53
MRPS28Q9Y2Q9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPS28Q9Y2Q9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.34■□□□□ 0.53
MRPS28Q9Y2Q9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms