Protein–RNA interactions for Protein: Q9Y2K5

R3HDM2, R3H domain-containing protein 2, humanhuman

Known RBP Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2Q9Y2K5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 AL138724.1-201ENST00000606771 1088 ntBASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 AC136469.2-201ENST00000623944 1028 ntBASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.14■■□□□ 1.14
R3HDM2Q9Y2K5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
R3HDM2Q9Y2K5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
R3HDM2Q9Y2K5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
R3HDM2Q9Y2K5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
R3HDM2Q9Y2K5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
R3HDM2Q9Y2K5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.14■■□□□ 1.13
R3HDM2Q9Y2K5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.14■■□□□ 1.13
R3HDM2Q9Y2K5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
R3HDM2Q9Y2K5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
R3HDM2Q9Y2K5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.14■■□□□ 1.13
R3HDM2Q9Y2K5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
R3HDM2Q9Y2K5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
R3HDM2Q9Y2K5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
R3HDM2Q9Y2K5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
R3HDM2Q9Y2K5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
R3HDM2Q9Y2K5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
R3HDM2Q9Y2K5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
R3HDM2Q9Y2K5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
R3HDM2Q9Y2K5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
R3HDM2Q9Y2K5 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.13■■□□□ 1.13
R3HDM2Q9Y2K5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
R3HDM2Q9Y2K5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.13■■□□□ 1.13
R3HDM2Q9Y2K5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
R3HDM2Q9Y2K5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.12■■□□□ 1.13
R3HDM2Q9Y2K5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
R3HDM2Q9Y2K5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.12■■□□□ 1.13
R3HDM2Q9Y2K5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
R3HDM2Q9Y2K5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
R3HDM2Q9Y2K5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.12■■□□□ 1.13
R3HDM2Q9Y2K5 AC104564.3-201ENST00000582367 638 ntBASIC22.12■■□□□ 1.13
R3HDM2Q9Y2K5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.12■■□□□ 1.13
R3HDM2Q9Y2K5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
R3HDM2Q9Y2K5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.12■■□□□ 1.13
R3HDM2Q9Y2K5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
R3HDM2Q9Y2K5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
R3HDM2Q9Y2K5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
R3HDM2Q9Y2K5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
R3HDM2Q9Y2K5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
R3HDM2Q9Y2K5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
R3HDM2Q9Y2K5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
R3HDM2Q9Y2K5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
R3HDM2Q9Y2K5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.11■■□□□ 1.13
R3HDM2Q9Y2K5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
R3HDM2Q9Y2K5 AC011298.3-201ENST00000615796 283 ntBASIC22.11■■□□□ 1.13
R3HDM2Q9Y2K5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
R3HDM2Q9Y2K5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
R3HDM2Q9Y2K5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
R3HDM2Q9Y2K5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
R3HDM2Q9Y2K5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
R3HDM2Q9Y2K5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
R3HDM2Q9Y2K5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
R3HDM2Q9Y2K5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
R3HDM2Q9Y2K5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.1■■□□□ 1.13
R3HDM2Q9Y2K5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.1■■□□□ 1.13
R3HDM2Q9Y2K5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
R3HDM2Q9Y2K5 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
R3HDM2Q9Y2K5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.1■■□□□ 1.13
R3HDM2Q9Y2K5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
R3HDM2Q9Y2K5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
R3HDM2Q9Y2K5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
R3HDM2Q9Y2K5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.1■■□□□ 1.13
R3HDM2Q9Y2K5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.1■■□□□ 1.13
R3HDM2Q9Y2K5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.1■■□□□ 1.13
R3HDM2Q9Y2K5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
R3HDM2Q9Y2K5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
R3HDM2Q9Y2K5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
R3HDM2Q9Y2K5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
R3HDM2Q9Y2K5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
R3HDM2Q9Y2K5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.09■■□□□ 1.13
R3HDM2Q9Y2K5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
R3HDM2Q9Y2K5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.09■■□□□ 1.13
R3HDM2Q9Y2K5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
R3HDM2Q9Y2K5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
R3HDM2Q9Y2K5 DUX4L19-201ENST00000557448 1267 ntBASIC22.09■■□□□ 1.13
R3HDM2Q9Y2K5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
R3HDM2Q9Y2K5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
R3HDM2Q9Y2K5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
R3HDM2Q9Y2K5 AC003102.1-202ENST00000563394 1796 ntBASIC22.09■■□□□ 1.13
R3HDM2Q9Y2K5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
R3HDM2Q9Y2K5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.09■■□□□ 1.13
R3HDM2Q9Y2K5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.08■■□□□ 1.13
R3HDM2Q9Y2K5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
R3HDM2Q9Y2K5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms