Protein–RNA interactions for Protein: Q9UPT9

USP22, Ubiquitin carboxyl-terminal hydrolase 22, humanhuman

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP22Q9UPT9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP22Q9UPT9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
USP22Q9UPT9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP22Q9UPT9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP22Q9UPT9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP22Q9UPT9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP22Q9UPT9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP22Q9UPT9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP22Q9UPT9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
USP22Q9UPT9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
USP22Q9UPT9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.18■□□□□ 0.82
USP22Q9UPT9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP22Q9UPT9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
USP22Q9UPT9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP22Q9UPT9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP22Q9UPT9 AC133637.1-201ENST00000624115 1537 ntBASIC20.17■□□□□ 0.82
USP22Q9UPT9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP22Q9UPT9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP22Q9UPT9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.17■□□□□ 0.82
USP22Q9UPT9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.17■□□□□ 0.82
USP22Q9UPT9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP22Q9UPT9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP22Q9UPT9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
USP22Q9UPT9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
USP22Q9UPT9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP22Q9UPT9 OR7E47P-201ENST00000546390 1422 ntBASIC20.17■□□□□ 0.82
USP22Q9UPT9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP22Q9UPT9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP22Q9UPT9 LINC01006-201ENST00000333319 2292 ntBASIC20.16■□□□□ 0.82
USP22Q9UPT9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.16■□□□□ 0.82
USP22Q9UPT9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP22Q9UPT9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP22Q9UPT9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
USP22Q9UPT9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP22Q9UPT9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP22Q9UPT9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP22Q9UPT9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP22Q9UPT9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
USP22Q9UPT9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP22Q9UPT9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.16■□□□□ 0.82
USP22Q9UPT9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
USP22Q9UPT9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.16■□□□□ 0.82
USP22Q9UPT9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP22Q9UPT9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP22Q9UPT9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.16■□□□□ 0.82
USP22Q9UPT9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP22Q9UPT9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP22Q9UPT9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.15■□□□□ 0.82
USP22Q9UPT9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.15■□□□□ 0.82
USP22Q9UPT9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.15■□□□□ 0.82
USP22Q9UPT9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP22Q9UPT9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.15■□□□□ 0.82
USP22Q9UPT9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP22Q9UPT9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP22Q9UPT9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.15■□□□□ 0.82
USP22Q9UPT9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP22Q9UPT9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP22Q9UPT9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.15■□□□□ 0.82
USP22Q9UPT9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP22Q9UPT9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP22Q9UPT9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP22Q9UPT9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.15■□□□□ 0.82
USP22Q9UPT9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP22Q9UPT9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP22Q9UPT9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP22Q9UPT9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
USP22Q9UPT9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
USP22Q9UPT9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.14■□□□□ 0.81
USP22Q9UPT9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP22Q9UPT9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP22Q9UPT9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.14■□□□□ 0.81
USP22Q9UPT9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.14■□□□□ 0.81
USP22Q9UPT9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP22Q9UPT9 GUSBP5-201ENST00000418136 578 ntBASIC20.14■□□□□ 0.81
USP22Q9UPT9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
USP22Q9UPT9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.14■□□□□ 0.81
USP22Q9UPT9 pRNA.6-201ENST00000610482 90 ntBASIC20.14■□□□□ 0.81
USP22Q9UPT9 pRNA.5-201ENST00000612139 90 ntBASIC20.14■□□□□ 0.81
USP22Q9UPT9 pRNA.11-201ENST00000618423 90 ntBASIC20.14■□□□□ 0.81
USP22Q9UPT9 pRNA.13-201ENST00000619112 90 ntBASIC20.14■□□□□ 0.81
USP22Q9UPT9 AL117332.1-201ENST00000622628 974 ntBASIC20.14■□□□□ 0.81
USP22Q9UPT9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP22Q9UPT9 LINC01521-201ENST00000504184 1943 ntBASIC20.14■□□□□ 0.81
USP22Q9UPT9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.13■□□□□ 0.81
USP22Q9UPT9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP22Q9UPT9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP22Q9UPT9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP22Q9UPT9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.13■□□□□ 0.81
USP22Q9UPT9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP22Q9UPT9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP22Q9UPT9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP22Q9UPT9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
USP22Q9UPT9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP22Q9UPT9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP22Q9UPT9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.12■□□□□ 0.81
USP22Q9UPT9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
USP22Q9UPT9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP22Q9UPT9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
USP22Q9UPT9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP22Q9UPT9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms