Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
COMMD3Q9UBI1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD3Q9UBI1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD3Q9UBI1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD3Q9UBI1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.77■□□□□ 0.6
COMMD3Q9UBI1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD3Q9UBI1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.77■□□□□ 0.6
COMMD3Q9UBI1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD3Q9UBI1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.77■□□□□ 0.6
COMMD3Q9UBI1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD3Q9UBI1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.77■□□□□ 0.6
COMMD3Q9UBI1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.77■□□□□ 0.6
COMMD3Q9UBI1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD3Q9UBI1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD3Q9UBI1 FP325331.1-202ENST00000623531 1380 ntBASIC18.77■□□□□ 0.6
COMMD3Q9UBI1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
COMMD3Q9UBI1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
COMMD3Q9UBI1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COMMD3Q9UBI1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.76■□□□□ 0.59
COMMD3Q9UBI1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.75■□□□□ 0.59
COMMD3Q9UBI1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COMMD3Q9UBI1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
COMMD3Q9UBI1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
COMMD3Q9UBI1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
COMMD3Q9UBI1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COMMD3Q9UBI1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.75■□□□□ 0.59
COMMD3Q9UBI1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
COMMD3Q9UBI1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.75■□□□□ 0.59
COMMD3Q9UBI1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.75■□□□□ 0.59
COMMD3Q9UBI1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.75■□□□□ 0.59
COMMD3Q9UBI1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COMMD3Q9UBI1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COMMD3Q9UBI1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COMMD3Q9UBI1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COMMD3Q9UBI1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.75■□□□□ 0.59
COMMD3Q9UBI1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COMMD3Q9UBI1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COMMD3Q9UBI1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COMMD3Q9UBI1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.74■□□□□ 0.59
COMMD3Q9UBI1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
COMMD3Q9UBI1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
COMMD3Q9UBI1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD3Q9UBI1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
COMMD3Q9UBI1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
COMMD3Q9UBI1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.74■□□□□ 0.59
COMMD3Q9UBI1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD3Q9UBI1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD3Q9UBI1 AC120024.1-201ENST00000562672 995 ntBASIC18.74■□□□□ 0.59
COMMD3Q9UBI1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.74■□□□□ 0.59
COMMD3Q9UBI1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD3Q9UBI1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.74■□□□□ 0.59
COMMD3Q9UBI1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD3Q9UBI1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
COMMD3Q9UBI1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.74■□□□□ 0.59
COMMD3Q9UBI1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD3Q9UBI1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
COMMD3Q9UBI1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms