Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN1Q9P244 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LRFN1Q9P244 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
LRFN1Q9P244 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRFN1Q9P244 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRFN1Q9P244 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRFN1Q9P244 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRFN1Q9P244 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LRFN1Q9P244 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRFN1Q9P244 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRFN1Q9P244 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.63■□□□□ 0.73
LRFN1Q9P244 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.63■□□□□ 0.73
LRFN1Q9P244 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRFN1Q9P244 AC011767.1-201ENST00000617410 1153 ntBASIC19.63■□□□□ 0.73
LRFN1Q9P244 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LRFN1Q9P244 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRFN1Q9P244 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRFN1Q9P244 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LRFN1Q9P244 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
LRFN1Q9P244 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.62■□□□□ 0.73
LRFN1Q9P244 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRFN1Q9P244 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRFN1Q9P244 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRFN1Q9P244 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRFN1Q9P244 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRFN1Q9P244 ID1-201ENST00000376105 1233 ntBASIC19.62■□□□□ 0.73
LRFN1Q9P244 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.62■□□□□ 0.73
LRFN1Q9P244 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.62■□□□□ 0.73
LRFN1Q9P244 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.62■□□□□ 0.73
LRFN1Q9P244 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.62■□□□□ 0.73
LRFN1Q9P244 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRFN1Q9P244 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.62■□□□□ 0.73
LRFN1Q9P244 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRFN1Q9P244 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRFN1Q9P244 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRFN1Q9P244 AP006587.3-201ENST00000525742 1516 ntBASIC19.61■□□□□ 0.73
LRFN1Q9P244 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRFN1Q9P244 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRFN1Q9P244 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.61■□□□□ 0.73
LRFN1Q9P244 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRFN1Q9P244 AC026185.1-201ENST00000445748 174 ntBASIC19.61■□□□□ 0.73
LRFN1Q9P244 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.61■□□□□ 0.73
LRFN1Q9P244 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
LRFN1Q9P244 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LRFN1Q9P244 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LRFN1Q9P244 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.61■□□□□ 0.73
LRFN1Q9P244 AP001160.3-201ENST00000601484 763 ntBASIC19.61■□□□□ 0.73
LRFN1Q9P244 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRFN1Q9P244 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRFN1Q9P244 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.61■□□□□ 0.73
LRFN1Q9P244 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.61■□□□□ 0.73
LRFN1Q9P244 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LRFN1Q9P244 AC139530.1-201ENST00000575312 1977 ntBASIC19.61■□□□□ 0.73
LRFN1Q9P244 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRFN1Q9P244 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRFN1Q9P244 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.6■□□□□ 0.73
LRFN1Q9P244 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.6■□□□□ 0.73
LRFN1Q9P244 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.6■□□□□ 0.73
LRFN1Q9P244 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.6■□□□□ 0.73
LRFN1Q9P244 RAP2CP1-201ENST00000605103 478 ntBASIC19.6■□□□□ 0.73
LRFN1Q9P244 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRFN1Q9P244 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.6■□□□□ 0.73
LRFN1Q9P244 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
LRFN1Q9P244 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRFN1Q9P244 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.6■□□□□ 0.73
LRFN1Q9P244 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRFN1Q9P244 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRFN1Q9P244 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LRFN1Q9P244 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
LRFN1Q9P244 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.59■□□□□ 0.73
LRFN1Q9P244 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.59■□□□□ 0.73
LRFN1Q9P244 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LRFN1Q9P244 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.59■□□□□ 0.73
LRFN1Q9P244 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRFN1Q9P244 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRFN1Q9P244 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LRFN1Q9P244 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.59■□□□□ 0.73
LRFN1Q9P244 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.59■□□□□ 0.73
LRFN1Q9P244 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRFN1Q9P244 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRFN1Q9P244 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.59■□□□□ 0.73
LRFN1Q9P244 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.59■□□□□ 0.73
LRFN1Q9P244 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.59■□□□□ 0.73
LRFN1Q9P244 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRFN1Q9P244 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRFN1Q9P244 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
LRFN1Q9P244 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRFN1Q9P244 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.58■□□□□ 0.73
LRFN1Q9P244 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRFN1Q9P244 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRFN1Q9P244 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRFN1Q9P244 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.58■□□□□ 0.72
LRFN1Q9P244 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.58■□□□□ 0.72
LRFN1Q9P244 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.58■□□□□ 0.72
LRFN1Q9P244 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.58■□□□□ 0.72
LRFN1Q9P244 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.58■□□□□ 0.72
LRFN1Q9P244 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRFN1Q9P244 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
LRFN1Q9P244 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRFN1Q9P244 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms